| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2642 |
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| Symbol | |
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| ID | 7972404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2785781 |
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| End bp | 2786224 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793230 |
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| Product | Biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_002944533 |
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| Protein GI | 239815623 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.333418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCGCG GCCGCATGCA GTTTCGCCAC GGTGCGCGCG ACGAGCCGGA GATCAACCTG
ATCCCGTTCA TCGACGTGCT GCTGGTCATC CTGATCTTCC TGATGCTGTC GACCACCTAC
AGCAAGTTCA CCGAAATGCA GCTTCGGCTG CCGACGGCGG ACGTGGATTC GCAGCGCGAC
TATCCCAAGG AGGTGATCGT GGCGGTCTCC GCCGACGGCC GCTACTCGAT CAACAAGAAG
CCGGTGGCCG ACCGCAACGT GGACACCGTG GCCGCCGCAC TGGGCGCGGC CGCCACGGGC
GGCAAGGACA GCGTGGTCAT CATCAGCGCC GACGCCAGCA GCCCGCACCA GGCTGTGATC
ACGGTGATGG AAGCCGCTCG CCGCGTGGGA CTGGTGCAGA TCACGTTCGC AGCCCAGTCT
TCGGCGCAGC AAGCAGGGCA CTGA
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| Protein sequence | MSRGRMQFRH GARDEPEINL IPFIDVLLVI LIFLMLSTTY SKFTEMQLRL PTADVDSQRD
YPKEVIVAVS ADGRYSINKK PVADRNVDTV AAALGAAATG GKDSVVIISA DASSPHQAVI
TVMEAARRVG LVQITFAAQS SAQQAGH
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