Gene Vapar_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2616 
Symbol 
ID7972378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp2760260 
End bp2760817 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content63% 
IMG OID644793204 
Producthypothetical protein 
Protein accessionYP_002944507 
Protein GI239815597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0675936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGATG CACCCGCGGT GCTCGACGTC TCGGTCATCG CCGCATTGCG CGATGCCGAG 
GGCAAGATCT ATGTGCTGCG CGGCCTCAAG GTCATGCTGG CGCAGGACCT TGCCGCGCTC 
TACGGCGTCG AGACCCGGGT GCTGTTGCAG GCCATGCGCC GCAACCTCGA TCGTTTTCCG 
GCGGACTTCG CCTTCACCCT CGAGAACCAC GACCTCGAGG CTTTGAGATC ACAGCTTGTG 
ATCTCAAAAC CCGAGAGGCC CGGCTCCGGC GGCGCGCGCT ACCGCAGCGT GGCCTTCACC 
GAGCAGGGCG TGGCCATGCT GTCGAGCGTG CTGCGCAGCG AACGCGCGGT GGCCGTCAAC 
ATCGAGATCA TGCGGACCTT CGTCAAGCTG CGCAGCATGC TGTCGGAGCA TGCCGATCTC 
AAGCGCAAGC TGAATGCGCT GGAACAGCGA TACGACCAGA ACTTTCGCGA TGTATTCAAC 
GCGATCCATC AATTGATGGA TGAGCCGAAG CCGGGCGCCT ACAGCGGCCG CGGCATCGGT 
TTCACCAAGG ACAAATAA
 
Protein sequence
MADAPAVLDV SVIAALRDAE GKIYVLRGLK VMLAQDLAAL YGVETRVLLQ AMRRNLDRFP 
ADFAFTLENH DLEALRSQLV ISKPERPGSG GARYRSVAFT EQGVAMLSSV LRSERAVAVN 
IEIMRTFVKL RSMLSEHADL KRKLNALEQR YDQNFRDVFN AIHQLMDEPK PGAYSGRGIG 
FTKDK