Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2601 |
Symbol | |
ID | 7972363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2745428 |
End bp | 2746150 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644793189 |
Product | uridylate kinase |
Protein accession | YP_002944492 |
Protein GI | 239815582 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0528] Uridylate kinase |
TIGRFAM ID | [TIGR02075] uridylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGATC CCCGCCCAGC CCACAAGCGA ATCTTGTTGA AGCTGTCGGG TGAGGCGTTG ATGGGAGACG ATGCCTTTGG TATTAACCGC GCCACCATCG TCCGCATGGT CGAAGAGGTG GCCGAAGTGG TGAACATGGG TGTGGAAGTC GCCGTCGTGA TCGGCGGCGG CAACATCTTC CGCGGCGTTG CGGGAGGCTC GGTGGGCATG GATCGCGCCA CGGCCGACTA CATGGGCATG CTGGCCACCG TCATGAATTC GCTGGCCCTG GCCGACGCCA TGAACAAGCA GGGGCTGGTG GCGCGCGTCA TGTCCGCCAT CGCCATCGAG CAGGTGGTCG AGCCCTACGT GCGGCCCAAA GCGCTGCAGT ACCTCGAAGA GGGCAAGGTC GTGGTGTTTG CCGCGGGCAC CGGCAATCCG TTCTTCACCA CCGACACGGC CGCCGCGCTG CGCGGTGCCG AAATCGGTGC CGAGCTGGTG CTCAAGGCCA CCAAGGTCGA CGGCGTATAT TCCGCCGATC CGAAGACCCA TCCGGACGCA ACGCGCTATT CGACGCTCAC TTTCGACGAG GCAATCGCGC AGAATCTCGG CATCATGGAC GCCACGGCCT TTGCGCTGTG CCGCGACCAG AAGCTGCCGA TCAAGGTGTT CTCGATCTTC AAGAACGGCG CGCTCAAGCG CGTCGTCATG GGCGAGGACG AAGGCACGCT GGTGCATGCC TGA
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Protein sequence | MSDPRPAHKR ILLKLSGEAL MGDDAFGINR ATIVRMVEEV AEVVNMGVEV AVVIGGGNIF RGVAGGSVGM DRATADYMGM LATVMNSLAL ADAMNKQGLV ARVMSAIAIE QVVEPYVRPK ALQYLEEGKV VVFAAGTGNP FFTTDTAAAL RGAEIGAELV LKATKVDGVY SADPKTHPDA TRYSTLTFDE AIAQNLGIMD ATAFALCRDQ KLPIKVFSIF KNGALKRVVM GEDEGTLVHA
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