| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2565 |
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| Symbol | |
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| ID | 7970042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2708436 |
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| End bp | 2709875 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793152 |
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| Product | cobyric acid synthase CobQ |
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| Protein accession | YP_002944457 |
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| Protein GI | 239815547 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1492] Cobyric acid synthase |
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| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.263598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCC GATGCGTGAT GGTTCTCGGC ACGACCAGTG GCGCCGGCAA GAGCTGGCTG
ACCGCCGCGC TGTGCCGCTG GTACGCGCGC CAGGGCCTCA AGGTGGCGCC CTTCAAGGCG
CAGAACATGA GCAACAACGC CCGCGTGGTG GGCGGCGGCG AGATCGGCAG CGCGCAGTAT
TTCCAGGCAC TGGCCGCGCG TGCCGTGCCC GACGTGCGCA TGAACCCGCT GCTGCTCAAG
CCCGAGCGCG ACACCCACAG CCAGGTGGTG CTGATGGGGC AGGTGAGCGC GGAGCTCACG
GCCATGCCCT GGCGCGGACG CAGCGAGCGC GTGTGGCCGC AGATCGCGCA GGCGCTCGAC
GCGCTGCGTG CCGAGAACGA CGTGGTCGTG ATCGAAGGCG CCGGCTCGCC GGCCGAGATC
AACCTGATGG CCAGCGACAT CGTCAACCTG CGCGTGGCCC GCCATGCGGA TGCGCGCTGC
CTGCTGGTGA CCGACATCGA CCGTGGTGGC GCCTTCGCGC ATCTGTACGG CACCTGGGCA
TTGATGCCCG AAAGCGACCG CGCGCTGCTG CGCGGCTTCG TGCTCAACAA GTTCCGCGGA
GATGCTTCGC TCCTGGCGCC GGCGCCGCAG CAGCTGCAGG CGCTGACCGG CATCGCCACC
GTCGCCACGC TGCCGATGTG GCGGGAGCAC GGCCTGCCGG AAGAAGACGG CGTGTTCGAT
GACCGAAGCC ATGCGAGCGG TGCGGTGACC CGCACCGTTG CGGTCGTGGC CTACCCGCGC
ATCAGCAACC TCGACGAATT CCAGCCGCTC AAGAACGTGC CCGGCGTCCG CCTGGCCTGG
GCGCGCACGC CGGCGGAGCT GGCCGGCGCC GACTGGATCG TGCTGCCCGG CTCCAAGCAC
ACCAGCGGCG ATCTCGCGTG GCTGCGCGCG CAGGGGCTGG ACCGCGCCAT CGCGGCGCAC
GCGGCCCGCG GCGGCGCCGT GCTGGGCGTC TGCGGCGGCC TGCAGATGCT GGGCGAGGCG
CTGGTCGATC CGCACGGCAT CGACGGCAAT GCGCCCGGCC TGGGCCTGCT GCCGCTGGTG
ACGGTGTTCG AGCGCGAAAA GACCGTGCGC CACCGGGCGG CCGTCTTCGG CCAACTGGGC
GGCGCATGGG CGTCGCTCTC GAACGTGCCG GTGGCGGGCT ACGAAATCCA TCACGGCCAA
ACCGCCATCC ACCCCCAGAT GGCGCAGGAC GGCCATGCCG TGATGCCCGA GGGCCTGGCC
TGGCAGAACG CGCGCGGCAA CGTGCTGGGC CTCTATCTGC ACGGCCTGTT CGAGGACGCG
GCCGCGCTCC ACGCACTCTT CGGTGCCGCG GCACCCACGC TCGACGCCAC CTTCGACGGC
CTGGCCGATT TCATCGACAA CCACTTCGAG GCCGGCGTAC TGCAGGGCCT GATCGCATGA
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| Protein sequence | MTTRCVMVLG TTSGAGKSWL TAALCRWYAR QGLKVAPFKA QNMSNNARVV GGGEIGSAQY
FQALAARAVP DVRMNPLLLK PERDTHSQVV LMGQVSAELT AMPWRGRSER VWPQIAQALD
ALRAENDVVV IEGAGSPAEI NLMASDIVNL RVARHADARC LLVTDIDRGG AFAHLYGTWA
LMPESDRALL RGFVLNKFRG DASLLAPAPQ QLQALTGIAT VATLPMWREH GLPEEDGVFD
DRSHASGAVT RTVAVVAYPR ISNLDEFQPL KNVPGVRLAW ARTPAELAGA DWIVLPGSKH
TSGDLAWLRA QGLDRAIAAH AARGGAVLGV CGGLQMLGEA LVDPHGIDGN APGLGLLPLV
TVFEREKTVR HRAAVFGQLG GAWASLSNVP VAGYEIHHGQ TAIHPQMAQD GHAVMPEGLA
WQNARGNVLG LYLHGLFEDA AALHALFGAA APTLDATFDG LADFIDNHFE AGVLQGLIA
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