| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2543 |
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| Symbol | |
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| ID | 7970020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2686060 |
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| End bp | 2686485 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644793130 |
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| Product | UspA domain protein |
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| Protein accession | YP_002944435 |
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| Protein GI | 239815525 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.431262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATCC TCATTGCTGT CGACGGCAGC GCCTACACGC AGAAGGCGCT CAATTACCTG
CTGGCCAACC GCGCGATGTT CGTGGATGGC CATGAGCTGG TCATCGTGCA TGTCAGCACC
GGCATCTCGG GGCACGTGGC GCGCCACCTC AGCAAGGAGG TCATCGCCGA CTACTACGCC
GAGGAGAACG CCAAGGTGCT CGAACCCGTG GCGGCATTGC TTGCGCAGAA CGGCGTGAGC
AACTACACGA TCGACAAGCG CCATGGCCAT GCGGCCGAGG AAATCCTCAA GTCGGCGGCC
GCGGCGCATG CGCAGCTGAT CGTGCTCGGC ACCCATGGCC ACGGCATCTT CGGCCGCGCG
CTGATGGGCT CGGTGGCCAC CAAGGTGATC TCCGAGACCG ACACCTCGGT GCTGCTGGTG
CAGTAG
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| Protein sequence | MKILIAVDGS AYTQKALNYL LANRAMFVDG HELVIVHVST GISGHVARHL SKEVIADYYA
EENAKVLEPV AALLAQNGVS NYTIDKRHGH AAEEILKSAA AAHAQLIVLG THGHGIFGRA
LMGSVATKVI SETDTSVLLV Q
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