Gene Vapar_2477 details

Gene Information

• Locus tag: Vapar_2477
• ID: 7969542
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 2619383
• End bp: 2620051
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644793060
• Product: hypothetical protein
• Protein accession: YP_002944369
• Protein GI: 239815459
• TIGRFAM ID: [TIGR02215] phage conserved hypothetical protein, phiE125 gp8 family

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.140341
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACATCG TCATCGTCAC GCCCCCACCG GTTGAACCGG TGACGATCGA AGAGGCATTC 
GTGCATCTGC GCCTGGATGA TCCGACGGAG GACAACCCGG ACACCGCCGC GGTCGAGGCG 
CAGATCGTCA GCGCCCGCGA ACAGTGCGAG CAGATCACCC GCCGAGCGTT CGTGCAGCAG 
ACCTTGCGCC TCACGCGCGG CCCGGCACGC CGGAATGGCG AGCGCCGCGG CTGGGATTGG 
TTCATCGGCG GCGGGTGTGT GGCATGGGGC GACATCGAGT TGCTCCGCCC CCCATTCATC 
GAGATGGTGT CGCTGAAGTA TTTCGACGAC GCCAACACGC AGCAGACAGT TGCGCCGGCT 
GACTATTTCG TCACCTCCGA CCTGGTTCCG AAGCTCCGGT TCGTCAATGG GTTCAGCACT 
CCTTCCATCT ACCTGCGCGA CGACGCGATT CAGGTGGAGT ACGTAGCCGG CTACGCGCCG 
AAACCTGCGG ACCCGGATGC CGAACCGCCC ACACAGATCG ACTACCGCGC CAACGTGCCG 
GCGAGCATCA AGCAGGCGAT TCTTCTGGCT GTGCAGCTGC AGTACGACGA ACTCACGCCC 
GACAAGCGCA AGGCGCTGGA GAACGCGCGC GACGCGCTGC TTTCCAGCTA CCGCGTTCAC 
ACGTTCTAG 

 

Protein sequence

MNIVIVTPPP VEPVTIEEAF VHLRLDDPTE DNPDTAAVEA QIVSAREQCE QITRRAFVQQ 
TLRLTRGPAR RNGERRGWDW FIGGGCVAWG DIELLRPPFI EMVSLKYFDD ANTQQTVAPA 
DYFVTSDLVP KLRFVNGFST PSIYLRDDAI QVEYVAGYAP KPADPDAEPP TQIDYRANVP 
ASIKQAILLA VQLQYDELTP DKRKALENAR DALLSSYRVH TF