| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2473 |
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| Symbol | |
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| ID | 7969538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2616379 |
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| End bp | 2617062 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644793056 |
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| Product | peptidase S14 ClpP |
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| Protein accession | YP_002944365 |
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| Protein GI | 239815455 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.631102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCT TTGCCAAGAC CAGTGGCAAG CGCGGCGAGA TCTACGTCTA CGACGCGATC
GGCGGCGGAT TCTTCAGCGA GGGCGTCACC GCCAAGTCGT TCGCCGACTC GGTGAAGGCG
CTCGGCGCCG TGAAGGCGCT GGACATCTAC ATCAACAGCC CGGGCGGCTC GGTCTTCGAG
GGCTTGGCCA TCTACAACCA GATCAAGCGC TTCGACGGCG AGAAGATCGT GCACGTCGAC
GGCATCGCCG CCAGCATCGC GTCCGTGATC GCCATGGCCG GCGATGAAGT GCGCATCGCT
GCGAACGGAA CGATCATGAT CCACGACCCC TGGGGCATGG CCATGGGCAC CGCAGCCGAC
ATGCGCAAGC AGGCCGAGTC GCTGGACAAG GTGCGCGACG TGCTGCTCGA GAACTACGTC
GCCCGCACCG GCGGCAAGCG CGAAGACATC AGTTCCTGGA TGACCGCGGA GACGTGGATG
AACGCCGACG AAGCCGTCGA GCGCGGCTTC GCGACGAGCA AGGTCGAAGA GAAGCAATTC
AGCGCCGCCT TCCCGATGCT CGACAAATTC AACAAGGTGC CGGACAGCTT GCGCAAGCAG
GCGACCGCCT CCGATTCCCT CTTGGCGCGC ATGCAGATGC GTACTCAGAA ACTCAATCTC
GGGGCCAGCC CCAAGACCGC GTAG
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| Protein sequence | MKFFAKTSGK RGEIYVYDAI GGGFFSEGVT AKSFADSVKA LGAVKALDIY INSPGGSVFE
GLAIYNQIKR FDGEKIVHVD GIAASIASVI AMAGDEVRIA ANGTIMIHDP WGMAMGTAAD
MRKQAESLDK VRDVLLENYV ARTGGKREDI SSWMTAETWM NADEAVERGF ATSKVEEKQF
SAAFPMLDKF NKVPDSLRKQ ATASDSLLAR MQMRTQKLNL GASPKTA
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