Gene Vapar_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2428 
Symbol 
ID7970472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2591862 
End bp2592296 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID644793010 
ProductHNH endonuclease 
Protein accessionYP_002944320 
Protein GI239815410 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.178996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCA CCAAAGCACA ACGCGCCACG TTGCGCGAGA TGTTCGGCGG GCGCTGCTCG 
TACTGCGGCT GCGACCTCGG CGACCGCTGG CACGCTGACC ACTTCGAGCA CGTCGAGCGC
AAGATGAAAT GGGCCACAGC GCCGAACGGC TCGCGCCGGC TGGTCGCCAC CGGAGAGGTG
CATCGGCCTG AACGGGACAC GCTGGAGAAC ATGATGCCAT CCTGCGCGCC CTGCAACATC
GACAAGCACA GCATGACGTT GGAGGATTGG CGCGGCAAGC TCCAGAATGC CGTAGCCGTG
CTCTCGCGCA ACCAACCGAC ATTCCGCCAT GCCATGCGCT TCGGGCTCGT ACAGGAGACT
GGCGCAAAGG TCGAGTTCTA TTTCGAACGT GCTGCCGCCT CTACCGGGCG GGGAGAGGGG
GGAGAGGGAG CATGA
 
Protein sequence
MKLTKAQRAT LREMFGGRCS YCGCDLGDRW HADHFEHVER KMKWATAPNG SRRLVATGEV 
HRPERDTLEN MMPSCAPCNI DKHSMTLEDW RGKLQNAVAV LSRNQPTFRH AMRFGLVQET
GAKVEFYFER AAASTGRGEG GEGA