Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2428 |
Symbol | |
ID | 7970472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2591862 |
End bp | 2592296 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644793010 |
Product | HNH endonuclease |
Protein accession | YP_002944320 |
Protein GI | 239815410 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.178996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCA CCAAAGCACA ACGCGCCACG TTGCGCGAGA TGTTCGGCGG GCGCTGCTCG TACTGCGGCT GCGACCTCGG CGACCGCTGG CACGCTGACC ACTTCGAGCA CGTCGAGCGC AAGATGAAAT GGGCCACAGC GCCGAACGGC TCGCGCCGGC TGGTCGCCAC CGGAGAGGTG CATCGGCCTG AACGGGACAC GCTGGAGAAC ATGATGCCAT CCTGCGCGCC CTGCAACATC GACAAGCACA GCATGACGTT GGAGGATTGG CGCGGCAAGC TCCAGAATGC CGTAGCCGTG CTCTCGCGCA ACCAACCGAC ATTCCGCCAT GCCATGCGCT TCGGGCTCGT ACAGGAGACT GGCGCAAAGG TCGAGTTCTA TTTCGAACGT GCTGCCGCCT CTACCGGGCG GGGAGAGGGG GGAGAGGGAG CATGA
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Protein sequence | MKLTKAQRAT LREMFGGRCS YCGCDLGDRW HADHFEHVER KMKWATAPNG SRRLVATGEV HRPERDTLEN MMPSCAPCNI DKHSMTLEDW RGKLQNAVAV LSRNQPTFRH AMRFGLVQET GAKVEFYFER AAASTGRGEG GEGA
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