| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2422 |
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| Symbol | |
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| ID | 7970466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2586928 |
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| End bp | 2587995 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793004 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002944314 |
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| Protein GI | 239815404 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.892613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCTGA AACGACTTCT CTCCAACGAC ATGCCCCGAA GCCGCCTGCT GGCGCTGCTG
CTGGTGGCGC TGTTCATCGC GCTGGCGTTG GCGCCGTTCA TCTTCCCGGG CGTGAAGGCG
CTCAGCGTGG CGGCCAAGGT CCTGGTGTTC GTGGTGCTGG TCGCGAGCTT CGACCTGCTC
CTGGGCTACA CCGGCATCGT GAGCTTCGCG CACACCATGT TCTTCGGCAT CGGCGCCTAT
GGCATTGCCA TCTCGGCGTC GCGGCTCGGG CCCAATTGGG GCGCGGTGCT GCTCGGGCTC
GCGGCATCGC TCGCGGTCTC GCTGGTGCTC TCGTTCGCCA TCGGGCTGTT CTCGCTCAGG
GTGCGCGCGA TCTTCTTCGC GATGATCACG CTGGCGGTGG CCTCGGCCTT CCAGACGCTG
GCCTCGCAGC TGTCGGACTT CACCGGCGGC GAGGACGGCC TGACCTTCAA GCTGCCCGAG
CTGATCTCGC CGAGCTTCGA GTTCTCCGAA GACCCTTTCC TCGGCGTCTC GCTCGATGGC
CGGCTGCTGT GCTACTACCT GCTCTTCGTG GCTGCGGTGG TGCTGGTGCT CGCGCTGCTG
CGCATCGTGA ATTCGCCCTT CGGCCGCGTG CTGCAGGCCA TCCGCGAGAA CGAATTCCGC
GCCGAGGCCA TCGGCTACCG CGTGGTGGTG TACCGCACCA CGGCGGCCGT GCTATCGGCA
CTCTTTGCCA CGCTGGCCGG CGCCATGCTC GCGATCTGGC TGCGCTACAA CGGGCCCGAC
ACCTCGCTGA GCTTCGAGAT CATGATCGAC GTGCTGCTGA TCGTGGTGAT CGGCGGCATG
GGCACGATCT ACGGCGCGGC CATTGGCGCG GTGCTGTTCG TGGTGGCGCA GAGTTACCTG
CAGGACCTGC TGCGCGTGGG CAGCGAGGCC GCGAGCGGGC TGCCATGGCT CGCGGCGTTG
TTGTCGCCCG ACCGCTGGCT GCTGTGGCTG GGCGTGCTGT TCGTGCTCTC GGTCTATTAC
TTTCCGACCG GCATCGTCGG CAAGCTTCGG GCGAGGGCCG CGCGATGA
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| Protein sequence | MFLKRLLSND MPRSRLLALL LVALFIALAL APFIFPGVKA LSVAAKVLVF VVLVASFDLL
LGYTGIVSFA HTMFFGIGAY GIAISASRLG PNWGAVLLGL AASLAVSLVL SFAIGLFSLR
VRAIFFAMIT LAVASAFQTL ASQLSDFTGG EDGLTFKLPE LISPSFEFSE DPFLGVSLDG
RLLCYYLLFV AAVVLVLALL RIVNSPFGRV LQAIRENEFR AEAIGYRVVV YRTTAAVLSA
LFATLAGAML AIWLRYNGPD TSLSFEIMID VLLIVVIGGM GTIYGAAIGA VLFVVAQSYL
QDLLRVGSEA ASGLPWLAAL LSPDRWLLWL GVLFVLSVYY FPTGIVGKLR ARAAR
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