Gene Vapar_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2307 
Symbol 
ID7971164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2466613 
End bp2467074 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content69% 
IMG OID644792889 
Productputative phosphohistidine phosphatase, SixA 
Protein accessionYP_002944200 
Protein GI239815290 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.152569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTGA TCTTCTGGCG CCATGCCGAA GCCGAGGACT GGACCGAGGG CTGCGACGAC 
CTGCAGCGTT CCTTGACCGC GCGCGGCGAG AAGCAGGCCA AGCGCATGGC CAGCTGGCTC
GACCGGCAGC TGCCCGACGG CACGCGCATC ATCTGCAGCC CCGCGCGGCG CTGCGAGCAG
ACCGCGCTTG CGCTCGGCCG CAAGTACAAG CTGCGCGGCG AACTCGCCCC CGACACCACC
GCCGAGGCCA TGCTGGCCGC AGCCGGCTGG CCCAACGGCA AGTCGGTGGT GCTGATGGTC
GGGCACCAGC CTTCGGTGGG GCAGGCGATT TCGCTGCTTC TTGGCCTGAA GCAGGACAGC
TGCCCGGTGC GCAAGGGGTC GCTGTGGTGG ATTCGCACGC GCGAACGCGA TGGCGACGTG
CAGACCGTCG TGGTGACGGT GCAGTCGCCC GAGCTCCTCT GA
 
Protein sequence
MDLIFWRHAE AEDWTEGCDD LQRSLTARGE KQAKRMASWL DRQLPDGTRI ICSPARRCEQ 
TALALGRKYK LRGELAPDTT AEAMLAAAGW PNGKSVVLMV GHQPSVGQAI SLLLGLKQDS
CPVRKGSLWW IRTRERDGDV QTVVVTVQSP ELL