| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2300 |
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| Symbol | |
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| ID | 7971155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2458314 |
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| End bp | 2458721 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792881 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002944194 |
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| Protein GI | 239815284 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0137231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCTCTCT TTCCATCGAC CCTGTCTCCA CCAGCCGTGA CCATCAGCAC TGAAGAGCGC
CAATTTTTTG TGGCCATGGG CGAGCGCATC GCTCAGCTGC GCAAAGCGCG CAGCCTGCCC
CAGACTCAGC TGGCCGAGGC CCTGGGCGTG GCGCAGCAGA CGCTGCAGGC CTACGAGGCC
GGCACGCGGC GCATCCCAGT GTCGGCGCTG CCCACGGTGG CGCGCACGCT GTCGGTGACG
TTGGAGGAAC TGTTCGGCAA AGGCCAGCAG GCGGCGCGTA CCAGGCGCGG GCCGGTGCCC
AAGTGGGAGC AGCAGATGGA GGCGATTGCG CAACTGCCCA AAGCCAGGCA GGGATTCGCC
AGCGAGATGC TGGAGACGGT GTTGACCAAG CAGGAGGCGA GAACGTGA
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| Protein sequence | MALFPSTLSP PAVTISTEER QFFVAMGERI AQLRKARSLP QTQLAEALGV AQQTLQAYEA
GTRRIPVSAL PTVARTLSVT LEELFGKGQQ AARTRRGPVP KWEQQMEAIA QLPKARQGFA
SEMLETVLTK QEART
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