| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2273 |
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| Symbol | |
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| ID | 7970721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2416808 |
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| End bp | 2417698 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792855 |
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| Product | flagellar assembly protein FliH |
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| Protein accession | YP_002944168 |
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| Protein GI | 239815258 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.362027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCCGC AATCGGCTTC GGCGACCGAG TCCGTCGTCG GCGCGCCCGC GCGGCCGAGT
GTGGTGTTGC GCGACGTCGT CATGCAGGGG CAGGTCGCGC TGGCGCGGCC GCGCAGCCGC
GGACCGAACG TGCAGCCGTT GCAGGTACGG GCTCCGGCGC CGAATCGGGT GCCGGTCCAG
CCTGCGCGCA AACCGGAAGA GGGGGATGCA GCCGCCGCAG GGCACGGGCT TGCCGAGGTC
AATGCCGCCG TGATGGCAGT GCAACCCGGC GACGAAGCCC GGCGCGGGTA TGAGGAAGGG
CTTGCCAAGG GCATCGCGGA GGGACGCGCA CGCAGCGCAG AAGAGGCTCG GCAACTCGCT
ACGCAGGCGG CCGAGAAGGC AGAGCGGGAA CTGCGCGAAC ATGCCGATCG GCTGACGCAG
GAACTGAAGC AGCAAGCCCA GACGGCTTAC CAGGCGCGTG TTCAGACGCT GGACAAGTTG
ATCGCCGCGC TGCCGCCGCA GATCGAAGCG CGCCTGGCTG CCGCGCAGGA CGACATGCTG
GCGCTCTGCT TCGAGGCCGT CTGCCGGATG CTGGGCGAAC GCGCCGCAAT GCCCGAGACG
GTGCAGGCGC ACCTGGAGCA TGCCGTTGGC GGGCTGCGCA GCCGACGGCT GGTGGCGGTG
CATCTGCACC CTGACGATCT CGCGGCGCTT CAGAAGGCGC AGGGCGATGC GCCGTCTGCC
CGCTGGGGCA GCGAAGACGT GCAATGGATC GCCAGTCCGG ACATCGCGCT GGGCGGATGC
GTGCTGCAGT CGCCGGAAGG CGGACTCGAT GCCAGGTTCG AAACCCAATT GCATGCGCTG
CGGAGCCTGC TGCTTCAATC CCGCGCATCG CTGCGCTCGC AGGGCGCCTG A
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| Protein sequence | MPPQSASATE SVVGAPARPS VVLRDVVMQG QVALARPRSR GPNVQPLQVR APAPNRVPVQ
PARKPEEGDA AAAGHGLAEV NAAVMAVQPG DEARRGYEEG LAKGIAEGRA RSAEEARQLA
TQAAEKAERE LREHADRLTQ ELKQQAQTAY QARVQTLDKL IAALPPQIEA RLAAAQDDML
ALCFEAVCRM LGERAAMPET VQAHLEHAVG GLRSRRLVAV HLHPDDLAAL QKAQGDAPSA
RWGSEDVQWI ASPDIALGGC VLQSPEGGLD ARFETQLHAL RSLLLQSRAS LRSQGA
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