| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2270 |
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| Symbol | |
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| ID | 7969984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2414300 |
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| End bp | 2414665 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644792852 |
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| Product | flagellar hook-basal body complex protein FliE |
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| Protein accession | YP_002944165 |
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| Protein GI | 239815255 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1677] Flagellar hook-basal body protein |
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| TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACGGCTT TCTTGCCCAT CGAGGCCTTG TCCTCACTGT CGGCGCAGGC GCAATCGCTG
GTGGCGGCGG CGCAGTCGCA ATCGGTTGCG GGCGCCGTGC CGGGCATGCT GCCAGGCGCC
TCCAGCCCTA CGGGCGCATC CGCTGCCGGC TCCTTCGGGC AGATGGTGTC CGACGGCATC
TCGCAGGTCA ATAGCAAGCT CATCTCGAAC CAGGTCGACT TGCAGAAGCT CGCGCTCGGC
GATGCGCAGA ACCTGCACCA GCTCATGATC AATCTCGAGG AAAGCCGCGT GTCCTTCCAG
ATGATGATGC AGGTGCGCAG CCGCCTGCTC GAGGCCTACC AAGACATCAT GAAGATGCCG
ATATGA
|
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| Protein sequence | MTAFLPIEAL SSLSAQAQSL VAAAQSQSVA GAVPGMLPGA SSPTGASAAG SFGQMVSDGI
SQVNSKLISN QVDLQKLALG DAQNLHQLMI NLEESRVSFQ MMMQVRSRLL EAYQDIMKMP
I
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