Gene Vapar_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2232 
Symbol 
ID7969946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2379432 
End bp2379821 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content69% 
IMG OID644792820 
Producthypothetical protein 
Protein accessionYP_002944133 
Protein GI239815223 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCC GCATCGTTCG CCTGGGCACG CCGCGCACGG CCGGAGAGGG CCTGCGCATC 
GGCACCGTCC GCCGCCCGCC GCGCGGCGTT CCGAAGACCG AGTTCGCATC GCAGGACTGG
TATGACGTGT GGTATCCGAA CCTCGCGCCT TCCGCGGAGA CCATGAAGCT GGGCCAGGAG
GCGGAAACCC CCGCGCAGTG GAACGCCTTC ATGCGCAAGT ACAAGTCCGA GATGGCCGAG
GCCGATGCGA GCCGCAGCAT CGACCTGCTG GCCGCCCTGT CGCACAGCGC GGCGTTTTCG
GTCGGCTGCT ACTGCGAGGA CGAGTCGCGC TGCCACCGCT CGCTATTGCG CGGCCTGCTG
GCCGAGCGCG GGGCGGACAT CGCGAACTGA
 
Protein sequence
MSIRIVRLGT PRTAGEGLRI GTVRRPPRGV PKTEFASQDW YDVWYPNLAP SAETMKLGQE 
AETPAQWNAF MRKYKSEMAE ADASRSIDLL AALSHSAAFS VGCYCEDESR CHRSLLRGLL
AERGADIAN