Gene Vapar_2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2214 
Symbol 
ID7969928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp2361055 
End bp2361663 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content70% 
IMG OID644792802 
ProductChromate transporter 
Protein accessionYP_002944115 
Protein GI239815205 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2059] Chromate transport protein ChrA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.457485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGC CGACCATCGC CATGCAATGG CACGACTGGC TGGCGCTCTT CGGCCAGTAC 
CTGCTGCTGT CGCTGCTGTC GATCAGCGGC GCCATCACTA CGGTTCCGGA CATGCACCGC 
TACCTCGTTG CGCAGCACGG CTGGCTCAGC GATGCGCAGT TCAGCTCCTC GGTGGCCATC 
GCCCAGGCCG CGCCGGGGCC GAACGTGCTC TTCGTCGCGC TGATGGGCTG GAACGTCGGG 
CTCAATGCGG GCGGCGGCAT CGGCGCGGGG CCGGGTGCCT GGCTGCTGGG CCTGTTCGGG 
CTCATGGTCA CCATGCTGGG CATCATGCTG CCCAGCACCA CCCTCACCTA CCTGGCCACG 
CGCTGGGGCC ACCGCAACCG CGACCGGCGC GGCGTGCGCG CCTTCAAGCA GGGCATGGCG 
CCGGTGGTGG TGGGCCTGCT GATCGCCACC GGCTGGGTGC TGGCGGCGGG TAACCATGCC 
GGCGACGCGC CTGCATGGCA TCTGTGGCTG CTGACCGCAG TGGCCGCGCT TATCGTCTGG 
CGCACGCGCG TCCACCTGCT CTGGCTGCTG GGCGCGGGTG CGCTGCTCGG TGCCGTGGGC 
TTCGTCTGA
 
Protein sequence
MSQPTIAMQW HDWLALFGQY LLLSLLSISG AITTVPDMHR YLVAQHGWLS DAQFSSSVAI 
AQAAPGPNVL FVALMGWNVG LNAGGGIGAG PGAWLLGLFG LMVTMLGIML PSTTLTYLAT 
RWGHRNRDRR GVRAFKQGMA PVVVGLLIAT GWVLAAGNHA GDAPAWHLWL LTAVAALIVW 
RTRVHLLWLL GAGALLGAVG FV