Gene Vapar_2175 details

Gene Information

• Locus tag: Vapar_2175
• ID: 7973862
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 2325860
• End bp: 2326531
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644792763
• Product: hypothetical protein
• Protein accession: YP_002944076
• Protein GI: 239815166

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.669044
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TTGTTCTCGC CATGCTGATG GCCTTGGGCA GCCTGCCGCT CTGGGCACAG 
TCCAACGCGG CTGCGGGCAA TGCGAACTTC GAAGCGGAGC GCAGCCGGCT GGCCGCCGAG 
CGCGCGGCCA TCGACGCGCG CTTCGAGAAG GAGCGCGCCG CCTGCTACCA GAAGTTCGCG 
GTCGAGGACT GCCTGCGCGA CAGCCGCAAG CGCCGCCGCG TCGAGACCGA CCACATCAAG 
CGCCAGGAAA CGGCCATCAA CGACATCGAG CGCCAGCGCC GTGGTGCGGC CGAACTCGAG 
AAGCTCGACC AGAAGGCGGC CACGCGGCGC CCGCAGGACA CGCCCGAGAA GCAGGAAGAA 
GCTAAAAAAG CCCAGCAGGA CCGCGAGCAG CGCGCGGCCG ACCATGCGGC GAGCCGCGCC 
GCGACGGCGG CCGAGGCCGA CGAGCGCCGG CGCCAGCTCG AAGCCAAGCA GAAGGCCCAC 
GCCGACGAGC AAGCCAAGGC CGCCCAGCGG CGCGCCGAGG CGCCGGCGGC GGTCGAACGC 
TTCGAGAGCA AGCAGCAAAA GGCGGCCGAG CACCGGGCCA GCCGCGAGCG GCAGAACGCC 
GAGCGCACCA AGCCGCGCGG GGCGCCCTTG CCCCCGCCGC CGGCATCGCC GGCTTCGGCG 
CCCAGCCGCT GA 

 

Protein sequence

MKKIVLAMLM ALGSLPLWAQ SNAAAGNANF EAERSRLAAE RAAIDARFEK ERAACYQKFA 
VEDCLRDSRK RRRVETDHIK RQETAINDIE RQRRGAAELE KLDQKAATRR PQDTPEKQEE 
AKKAQQDREQ RAADHAASRA ATAAEADERR RQLEAKQKAH ADEQAKAAQR RAEAPAAVER 
FESKQQKAAE HRASRERQNA ERTKPRGAPL PPPPASPASA PSR