Gene Vapar_2157 details

Gene Information

• Locus tag: Vapar_2157
• ID: 7973844
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 2299447
• End bp: 2300088
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644792745
• Product: glutaredoxin
• Protein accession: YP_002944058
• Protein GI: 239815148
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0695] Glutaredoxin and related proteins

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATCCGA CCCACAAGAA ATCCTCCTTG CATCGCCTGT CCGGCGCCGC CCTGCTGCTC 
GTCGCCGCAG GCGCGATGGC CCAGCCGATC TACCGCAACG TCGACAAGAA CGGCAAGGTC 
ACCTTCTCGG ACCGTGCGCC CACCGCGAGC ACGGAACCGG CCGCGGCGCC GCAGGCCGGC 
ATCACGGCTC CCGCCAATGC CGGGCTGCCC TACGAGCTGC GGCAAGTGGC GCAGCGCTAC 
CCCGTGACGC TCTACAGCAG CGAGGAATGC GCGCCCTGCG GCACGGCCCG TTCGCTGCTC 
GTCACGCGCG GCATCCCCTT CGAGGAGCGC ACCGTCAAGA GCAACCAGGA CGTCGAGGCG 
CTGCAGCGCC TGAGCAACCA GTCCTCGCTG CCGCTGCTGA CGATCGGCTC ACAGCAGCTC 
AAGGGCTACT CGGACGCCGA ATGGTCGCAA TACCTCGACG CCGCGGGCTA TCCGAAGAGC 
AACAGCCTGC CTGCCGGCTA CCGCAATCCG CCGGCCCGGC CGCTGGTGGC GGCGCAGCCG 
GCGCCCGCTG CGCGCGAGCC CGCGCCCGTT GCCCAACCGG CGCCGGCCGC GCCCGCACCG 
AGCGGTCCGA GCCCGAGCAA CCCCGCCGGC ATCAAGTTCT GA 

 

Protein sequence

MHPTHKKSSL HRLSGAALLL VAAGAMAQPI YRNVDKNGKV TFSDRAPTAS TEPAAAPQAG 
ITAPANAGLP YELRQVAQRY PVTLYSSEEC APCGTARSLL VTRGIPFEER TVKSNQDVEA 
LQRLSNQSSL PLLTIGSQQL KGYSDAEWSQ YLDAAGYPKS NSLPAGYRNP PARPLVAAQP 
APAAREPAPV AQPAPAAPAP SGPSPSNPAG IKF