| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2125 |
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| Symbol | |
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| ID | 7973811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2268956 |
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| End bp | 2269741 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792712 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002944026 |
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| Protein GI | 239815116 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.541973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACG CGATTGGCGG CAAAGAAGAA GTCAGCGCGC TTGCCAGGGG GCTGGCCTTG
CTCAAGGTCA TCGGAATGGC AGCCGCACCC ATCAGCAATC GCGACCTGGC CGAAACCACC
GGCATCCCCA AGGCCACCGT GTCCCGCCTC ACGGCCACGC TGGTGGCCGC GGGCTACCTG
AAGCAGTCGC AGGACAGCGA CCGCTTCAGC CTCGGGCCCG CGCTGCTCGA CATGAGCAGC
CGCTACCTGC GCCACTTCGA CCTGCGCACG GTGGCCCGGC CGCATCTCTC GGAGCTGTCC
GAATTTGCCG GCGCCAGCGT CCACATGGGC GTGCGCGACG AGCTCGACAT GCTCATCATC
GATTCGCTGC GCCCCCGCTC CGCGCTGATC AGCTCGCGCA TCGAAGTGGG CTCGCGCATG
ACCATTGCCA CCTCGGCCGC GGGCCGCGCC TACCTTGGCG CGCTACCCGC CGCCGAGCAG
GCCGAGGTGC TCGAGCAGAT CCGCCTGGAA AGCGGCGAGA ACTGGCCTTC GATCGAGCCG
CGTCTGATGG CCGGGCTCGA CGAATACGCG CGCCTGGGCT ATTGCAGCTC GTTCGGCGAG
TGGCATCCGC ACATCCACGC CCTGGGCTTT GCGCTCAAGG GCCCGCGCGG CGAGCGCTAC
GGCGTGAGCT GCGGCGGCCC CGCCTACCTG CTGCCCAAGG ACGTGATGCT CGGCCGCGTC
GCCCCCAGGC TCCTCGAAAC CGCCCAGCGG ATCTCCCAGG AAGCCGGCAC CGTCAGCACC
GACTGA
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| Protein sequence | MNDAIGGKEE VSALARGLAL LKVIGMAAAP ISNRDLAETT GIPKATVSRL TATLVAAGYL
KQSQDSDRFS LGPALLDMSS RYLRHFDLRT VARPHLSELS EFAGASVHMG VRDELDMLII
DSLRPRSALI SSRIEVGSRM TIATSAAGRA YLGALPAAEQ AEVLEQIRLE SGENWPSIEP
RLMAGLDEYA RLGYCSSFGE WHPHIHALGF ALKGPRGERY GVSCGGPAYL LPKDVMLGRV
APRLLETAQR ISQEAGTVST D
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