| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2110 |
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| Symbol | |
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| ID | 7972512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2251950 |
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| End bp | 2252867 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644792697 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002944011 |
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| Protein GI | 239815101 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATTTCG CATTTTCAAC CGCCTCGCAC GACCACTGGC ATGACGTCGT CTGCCAGTAC
TGCATCCCCG CAGCGAGCCA GACCGTGCAT CGGCAAAACT TCGACGCGGC GGTAACCGGC
CGCTCCGTCG GGGCGCTGGA TGCGGTAACC CTGGTGGCCC CGGAACACAC TTGGACGCGG
GATACCGCGG ATATCAGGCG CGGGCCCGAG TCCAGTCTGT GGCTATCCCT TATGGAGTCG
GGCGTTGGTT ACGTCGAACA GAACGGGAAT TCAACGGTGC AGAACACCGG CGATATCGTG
CTCTACGATG CCGCACGCCC GTGGAAGTAC CGTCTGAACA TGCAGACCTT CTACACCGTC
CGCATACCGC GTGACCTGCT CACTCGACGT TCTCCGGCAG CCGAGCGCTT CGTCGCAACA
TCATTGGGCG CTGGCACGGG TTTTCGGCCT GTCCTCGGAA GCCTCATCAA GGAGCTTCGC
GAGAATTCGG CCTTGGCGAG TGCCCCAGCA GCAGCAACGC ATGTGACCAC CTCGCTGCTG
GAGCTCCTAG CGTGCGTCAT CGACCTGCAC GCGGGTAACG GCCCCAGCCA GAGCGTCACC
GACGCCCTGT ACAAGCGTGC GTGCGCCTAT GTCATGCAGC ACATCGAGGA TCCGGAACTC
TCCATAGCCT CGGTCGCAAA ATCTGAACGC ATCTCCTTGC GCACGCTGGC GCGAGTGTTT
GCCGCCAACG GGACAACGCC CATGCGGTAC ATCTGGCAGA AGCGCCTCGA AGCCAGCTAC
TGCGCCATGG CCCAGGGTTC CGTGCGCAAG GTGTCAGAGG CTGCCATGAA TTACGGCTTC
TCCGACTTGT CCCACTTCAG CCGGGCGTTC AAGAAGGCTT TCGGAGTCAG TCCCCAAGCC
GTGATGCATC GCCAATAA
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| Protein sequence | MDFAFSTASH DHWHDVVCQY CIPAASQTVH RQNFDAAVTG RSVGALDAVT LVAPEHTWTR
DTADIRRGPE SSLWLSLMES GVGYVEQNGN STVQNTGDIV LYDAARPWKY RLNMQTFYTV
RIPRDLLTRR SPAAERFVAT SLGAGTGFRP VLGSLIKELR ENSALASAPA AATHVTTSLL
ELLACVIDLH AGNGPSQSVT DALYKRACAY VMQHIEDPEL SIASVAKSER ISLRTLARVF
AANGTTPMRY IWQKRLEASY CAMAQGSVRK VSEAAMNYGF SDLSHFSRAF KKAFGVSPQA
VMHRQ
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