| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2082 |
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| Symbol | |
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| ID | 7972484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2227494 |
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| End bp | 2227802 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792673 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002943987 |
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| Protein GI | 239815077 |
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| COG category | [K] Transcription |
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| COG ID | [COG1476] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGAAGC GAGCCATTCA GCGAGGACGC CCTACCGGCG CGACGACCTT CGAGGTCGCG
CCGGCGCTGG CGTTCGGCGC TGTGGTGCGC GCACTGAGAA CCGAAGACGG CATCGCCCAG
GAAACGCTGG CGCACCTCGC CGGCATCGAG CGCTCTCACA TGGGCAAGAT CGAGCGCGGC
GAGCACATGC CGACGCTGGT TCTGGTGCTC AGGATCGCTC GGGCACTGGG CCGCAGCGCC
GGCGAGCTGA TGCTCGAGAC AGAGGCCAGG TTGCCGAAGG AATGGCACCA GCCTCCCGCA
GAAGGCTGA
|
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| Protein sequence | MQKRAIQRGR PTGATTFEVA PALAFGAVVR ALRTEDGIAQ ETLAHLAGIE RSHMGKIERG
EHMPTLVLVL RIARALGRSA GELMLETEAR LPKEWHQPPA EG
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