| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2072 |
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| Symbol | |
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| ID | 7972474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2217470 |
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| End bp | 2218873 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792665 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943979 |
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| Protein GI | 239815069 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.873816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCTT CTGTTCTGCT GGCTGTCGAG AACCTCTGCG TGCACGTTGG GGCCAGGCCG
CTGCTGCGCA ATGTGTCTTT CAAACTTCGC GCAGGCGAAG TGCTGACGCT GCTCGGCGAA
AGTGGTGCTG GAAAATCGCT GCTGGCGCAG GCCGTGATGG GTAACCTTCC GGCTGCATTA
CGCGCTGGTG GTTCGGTCAC ATTGGACGGC ATCGAAAGCC GTGCCGAGGA CGCCCGCGTG
CGTCGCCCGC ATTGGGGCCG CACGCTCGCG TTGCTGCCCC AGGAGCCCGC GATGGCGCTG
GATCCGCTGA TGCGCATCGC GCCTCAGTTG GCCGAAACGC ACGAGCTGGT TCGCGGCGCG
GCCTTCGAAG CGGCAGGGGC TGCCGCCGTG AGCGACCTGA GGACGGCGGG ATTGGCTGCC
TCCGCGCGGC AGTATCCGTG GCAGCTCTCC GGCGGCATGG CGCAGCGTGC TGCCGCAACG
GTCGCCAGCG CGGGCGGCGC GCGCATCCTG CTGGCCGACG AACCCACCAA GGGCCTTGAT
GGGCATTGGC GCGATCACAC CGTTGCGATG CTTCAGGCGG TGCAGCGTGC CGGTGGCTGC
GTGGTGGTCA TCACGCACGA TCTGCGCGTT GCGCAGGCTC TCGGTGGGCA ACTGATTGTT
CTGCGCGCTG GCGAAGTGGT GGAACAAGGT GACTCAGCCA CCATTCTGGC GAGTCCGCAG
CATGCATTCA CGCGGCGGTT GGTCGAGGCC GATCCTGCGC ATTGGCCCAG GCGCATTGCA
GCGGTCGCGG GGGCACCAGT GCTGAGTGCG CAAGACCTGT CGAAAGGCTT CGGTGGCAGA
TCGTTGTTCG ACAGCCTCGA CCTGCAGATT CACGCCGGCG AGCGTTTCGT GGTGCAGGGG
CCCAGCGGGA CCGGCAAGAG CACGCTGGGT AACGTCCTGC TGGGCCTGCT GCCGGCCGAT
CGGGGCGTCG TGCGTCGTGC CGAAGGCCTG GCTTCGACCG CTTTTCAGAA GCTCTACCAA
GACCCGGTCG GCTCGTTCGC TCCCCGCATC AGCCTGGAAA ATTCACTGCG CGATGTTGCT
GCACGTCATC GTTGTGCGTG GTCGACCGTG CTGCAGCAGC TCGAACGGCT GGGCGTGCCC
GCCGACCTGC TGGCACGCCG GCCAGCAGAA GTCTCCGGTG GCGAGTTGCA ACGCGTCGCG
CTCGCGCGCG TTCTCACCGT GCGGCCAGCG CTGGTCTTTG CCGACGAGCC AACGTCGCGA
TTGGATCCGG TGTCCCAACA GGAAGCGATG ACTGTCCTGC TCAATGTTCT GGAGGAGCGC
GGTGCCGCGC TGATGTTAGT GACGCACGAT GACGATATTG CGAATGCCGT CGGAACGAAT
CGATGGAGGT TCGCAGAGCC CTGA
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| Protein sequence | MTASVLLAVE NLCVHVGARP LLRNVSFKLR AGEVLTLLGE SGAGKSLLAQ AVMGNLPAAL
RAGGSVTLDG IESRAEDARV RRPHWGRTLA LLPQEPAMAL DPLMRIAPQL AETHELVRGA
AFEAAGAAAV SDLRTAGLAA SARQYPWQLS GGMAQRAAAT VASAGGARIL LADEPTKGLD
GHWRDHTVAM LQAVQRAGGC VVVITHDLRV AQALGGQLIV LRAGEVVEQG DSATILASPQ
HAFTRRLVEA DPAHWPRRIA AVAGAPVLSA QDLSKGFGGR SLFDSLDLQI HAGERFVVQG
PSGTGKSTLG NVLLGLLPAD RGVVRRAEGL ASTAFQKLYQ DPVGSFAPRI SLENSLRDVA
ARHRCAWSTV LQQLERLGVP ADLLARRPAE VSGGELQRVA LARVLTVRPA LVFADEPTSR
LDPVSQQEAM TVLLNVLEER GAALMLVTHD DDIANAVGTN RWRFAEP
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