| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2029 |
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| Symbol | |
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| ID | 7969822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2172993 |
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| End bp | 2173997 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792626 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943940 |
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| Protein GI | 239815030 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCTGA AGAAGAACTG GAAGGGCCGC ACCCTGCTGG CCGCATCGCT GGGCGCAGGC
CTGCTGGCCG TGCAAGCGCC GGCCGCGGCG CAGGCGCCCT GGCCCGAGAA GCCCATCACC
ATGGTCGTGC CGTACTCGGC CGGCGGCCCC ACCGACGTGG TCGCGCGCAT GCTCGCGATT
CCCATGGGCA AGTCGCTCGG GCAGACCGTG ATCGTCGAGA ACACCGTGGG CGCGGGCGGC
ACCATCGCGC CCGCGCGCGT GGCCAAGGCG GCGCCCAACG GCTACACCAT CCTGATCCAC
CACATGGGCA TGGCCACCGC GCCCGCGCTC TACAAGAAGC TCAACTACGA CCCGCTGAAG
GACTTCGAAT ACGTGGGCCA GGTGATGGAC GTGCCCATGA CCCTGCTCTC GCGCAAGGAC
TTTCCGGCCA GCAACTTCCA GGAACTGCTG GCCTACGTGA AGACGAACAA GGACAAGGTC
ACGCTTGCCA ACGCCGGCAT CGGCGCGGTC TCGCAGCTGT GCGGCATGCT GCTGGCGCAC
CAGATCGGGG TGCAGCTCAC CACCGTGCCC TACAAGGGCG CCGGCCCGGC GCTCAACGAC
CTGATGGGCG GACAGGTCGA CCTGCTGTGC GACCAGACCA CGCAGACCGC GCCGGTCATC
AAGGACGGCA ACCGCGTCAA GGTGTTCGGC GTGACCACGC CGAAGCGCCT GTCCAGCATG
CCCAGCATTC CCACGCTCGA CGAGCAGGGC CTGAAGGGTT TCGACGTGAA GGTGTGGCAC
GGCATCTACG CGCCCAAGGG CACGCCGCCG GCCGTGATGG AAAAGCTCAA CACGGCCCTG
CGCGCCGCGC TGCAGGACGA CATGGTCAAG CACCGCTTCG CCGATCTGAG CACCGAGGCG
GTGCCGATGG ACAAGGTGAC GCCCGAAGCG CTGCGCACCC ACCTGGCGGC CGAGACCGAG
AAGTGGGGGA AGGTGATCAA GGCGGCGGGG GTGCAGGCGG ACTAG
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| Protein sequence | MNLKKNWKGR TLLAASLGAG LLAVQAPAAA QAPWPEKPIT MVVPYSAGGP TDVVARMLAI
PMGKSLGQTV IVENTVGAGG TIAPARVAKA APNGYTILIH HMGMATAPAL YKKLNYDPLK
DFEYVGQVMD VPMTLLSRKD FPASNFQELL AYVKTNKDKV TLANAGIGAV SQLCGMLLAH
QIGVQLTTVP YKGAGPALND LMGGQVDLLC DQTTQTAPVI KDGNRVKVFG VTTPKRLSSM
PSIPTLDEQG LKGFDVKVWH GIYAPKGTPP AVMEKLNTAL RAALQDDMVK HRFADLSTEA
VPMDKVTPEA LRTHLAAETE KWGKVIKAAG VQAD
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