| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2011 |
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| Symbol | |
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| ID | 7969804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2155623 |
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| End bp | 2156936 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792608 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002943922 |
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| Protein GI | 239815012 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGCTGC GCAAAGAACT CGGCGTCGTC GAGAACTCCT ACTACGAAGC CAGCGTGCAA
CGGGCGGCGC GCTTCGAACC CGCGCGCCCG CTCGAAGGCA TTGCCACCGC CGACGTCTGC
GTGGTGGGCG GCGGGCTCGC GGGGCTGTCG GCCGCGCTCG AGCTTGCCAT GCGCGGCTAC
GCGGTGGTGC TGCTGGAGGC GCAGCGCGTG GGCTGGGGTG CCTCGGGCCG CAACGGCGGC
CAGGTGATCG TGGGCTTCGG CGCCGACGGC GAAGAGGCCA TCGAAAAGCA GTTCACGCCC
GAGGATGCGC GGCGCGCCTG GGACATATCG GTCGAGGGCC TGGATCTGCT GCAGGACCGC
ATCGCGAGCC ATGCGATCGA CTGCGACTGG CAGGCCGGCT ACCTGAACCT GTCGGTCAAG
CCCGCGAAGT CGCGCGCGCT GCGTGAATGG ATGGACCACG TGGGCCGCGT CCACGGCTAT
CCGCTCCAAT GGCTCGGGCC CGGCGAGGTC GCGCAGTGCG TGGACAGCAA GCGCTTCGAC
GGCGGCACCT TCGATGTGCG CTCGGGCCAT CTGCATCCGC TGAAGTATTC GCTGGGCCTG
GCGTCCGCGG CGCGCGCGGC CGGCGCGCAG CTGCACGAGA ACTCGGCCGC GCAGGTGATC
GAGCGCGGCG CGCGGCCCGT CGTCAAGACC GCGCAGGGCG AGGTGCGCTG CAGCTTCGTG
GTGCTGGCGG GCAACGTCTA CCTGGCCGAG TACGGCGACG ACGTGGCGCC CGAGGTCTCG
TCGCGCATCA TGCCGGTGGG CACCTACATG ATCGCGACCG AGCCGATGGA GCCGGCGCGC
GCCGATGCGC TCATGCGCGG CAGGCCGGCC GCGTCGGACA CCAACTTCGT GCTCGACTAC
TTCCGGCTGA GCGCCGACCA TCGCCTGCTG TTCGGCTCGG GCGACAGCTA CAGTGCGCGG
ACGCCGCGCA ACCTCATCGA GAAGATCCGC AAGAGCATGC TCGCGGTGTT TCCGCAGCTG
GCGGACCTGG GCATCGACCA CGCATGGGGC GGCTTCGTCG ACATCACGAT GAACAAGGCG
CCCGACTTCG GGCGCATCGG CACCAACATC TACTACCTGC AGGGCTTCTC GGGCCACGGC
CTGGCGCTCA CGGGCATGGC GGGCAAGCTG GCGGCCGAGG CCATCGCGGG CCAGGCGGAG
CGCTTCGACC TGTTCGCGCG CATCGGGCAC CACGCCTTTC CGGGCGGCAC CCTGCTGCGC
ACGCCAGCGC TGGTGCTGGG GATGATGTAC TACCGGCTGC GGGACTTTCT CTAG
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| Protein sequence | MLLRKELGVV ENSYYEASVQ RAARFEPARP LEGIATADVC VVGGGLAGLS AALELAMRGY
AVVLLEAQRV GWGASGRNGG QVIVGFGADG EEAIEKQFTP EDARRAWDIS VEGLDLLQDR
IASHAIDCDW QAGYLNLSVK PAKSRALREW MDHVGRVHGY PLQWLGPGEV AQCVDSKRFD
GGTFDVRSGH LHPLKYSLGL ASAARAAGAQ LHENSAAQVI ERGARPVVKT AQGEVRCSFV
VLAGNVYLAE YGDDVAPEVS SRIMPVGTYM IATEPMEPAR ADALMRGRPA ASDTNFVLDY
FRLSADHRLL FGSGDSYSAR TPRNLIEKIR KSMLAVFPQL ADLGIDHAWG GFVDITMNKA
PDFGRIGTNI YYLQGFSGHG LALTGMAGKL AAEAIAGQAE RFDLFARIGH HAFPGGTLLR
TPALVLGMMY YRLRDFL
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