| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1935 |
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| Symbol | |
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| ID | 7971114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2069508 |
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| End bp | 2070482 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644792534 |
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| Product | carbamoyl phosphate synthase-like protein |
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| Protein accession | YP_002943848 |
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| Protein GI | 239814938 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGC GGAACCTGAA TACGCTGGTT CTGTCAGCAG GTCGGCGCGT GGATCTGATG
CATGCCTTCA GGGAGGAAAT GACCAAGCGC GGCATGTCCG CGCAACTCTT CGCAACAGAC
CTGCGGCCCG AACTTTCCGC GGCTTGTCGC GTCGCGGATG AAGCGTTCAA GGTTCCCCGG
GTGACAGATC CCGGATACGC GGATCTTCTT CTTGAGCTGT GCCTACGCAA TGACGTGGGA
CTGGTGGTGC CCACGATCGA TACCGAATTG CTCGGACTGG CGCAGGCACG TGAAACTTTT
GCCGAGCATG GCGTCCATGT GGTTGTTTCC TCCACTACGT TGATCGAGCA ATGCCGCGAC
AAGCGGCGGT CCAGTGGTCT CTTTGCCCAA CTCGACATTG ACACACCGCG GATACAGGAC
AAGAGCCGAT TGGAGTTTCC CTGCTTTGCG AAACCGTTTG ATGGAAGCCG CAGCATCGGG
GCTTTGATGG TCGCTTCGCA GTCTGCTCTA ACCACGGAAA TGCTCGCAGA CTCGAAGCTC
ATGTTCATGG ACTATGTCGA TTCGTCCCAT CACGAATACA CAGTCGATGC CTATTACGAC
CGATCCGGGG TCCTGCGCTG CCTGGTCCCG CGCCAACGGT TGGAGGTGCG CGACGGTGAG
GTGTCCAAGG GCGTAACGCG CAGGGACCAT GTCTATGCGT ATCTTCTTGA TCGTCTTCGC
GTGCTGCCGG GAGCGCGCGG CTGCTTGACG ATTCAGCTCT TTGCCAAGTC GCAGCCCCAG
CGCTTTGCCG CGTTGGAGAT CAACCCACGC TTTGGCGGCG GTTTCCCGCT GTCGTATGCG
GCAGGTGCCC GTTACCCAGG TTGGTTGATC GACGAGTATT TGCTAGGAGA AGAAGTCGCG
TTCTTCGATG GCTGGGAGCC GAACTTGCTC ATGCTGCGCT ACGACGCGAA GGTGATGGTC
CGTGACTATC AGTGA
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| Protein sequence | MSKRNLNTLV LSAGRRVDLM HAFREEMTKR GMSAQLFATD LRPELSAACR VADEAFKVPR
VTDPGYADLL LELCLRNDVG LVVPTIDTEL LGLAQARETF AEHGVHVVVS STTLIEQCRD
KRRSSGLFAQ LDIDTPRIQD KSRLEFPCFA KPFDGSRSIG ALMVASQSAL TTEMLADSKL
MFMDYVDSSH HEYTVDAYYD RSGVLRCLVP RQRLEVRDGE VSKGVTRRDH VYAYLLDRLR
VLPGARGCLT IQLFAKSQPQ RFAALEINPR FGGGFPLSYA AGARYPGWLI DEYLLGEEVA
FFDGWEPNLL MLRYDAKVMV RDYQ
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