| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1933 |
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| Symbol | |
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| ID | 7971112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2067997 |
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| End bp | 2068896 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644792532 |
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| Product | glycosyl transferase family 2 |
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| Protein accession | YP_002943846 |
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| Protein GI | 239814936 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCGTG TTGCCGTATT GTTGGCTACG CATAATGGCT CCAAATGGAT TGAGGCTCAG
ATTGATTCAA TTTTAAATCA AATAGGAGTC GAGGTTCAAA TATTCGTTAG TGATGATCGT
TCGAGCGATA ATACATTGGC AATTCTGGAT GATTTTGCTC GAGACGAGCG AGTGTCTAGG
CTGGAGAGGG TAGATGCCGG CTACGGTTCT CCGGCTGCGA ATTTTTTTCG CCTTCTCTTA
GAAGCGCCCA TTGAAGTTGA TTTTGAGTAC GTCTTCTTGT CGGATCAAGA TGATTATTGG
CTCCCGAATA AAATAATTTC GGCAATCCAA GAGATGCAGC TCAATAAAGC TGATTGCTAT
GCTTCAGATC TGATTTGCAC CTATCCCGAT GGTGCTCGAA GATTTCTTAA AAAAAGTTAC
CCGCAAACGA AGAATGATTA TCTGTTCCAA GGGGCCAGCG CCGGCTGTAC TTACGGGCTA
AGCGCTCGGG CTGCCGTCAC TTTTAGAGAC ATTATTGGGC GACTGGGCGA CGCGGTCCGT
AAGGATATTT CGCACGATTG GGCAATTTAC GCTGTTACTC GTTCACATGG ATTTCAATGG
ACGTTGGATG CGCGAGCATA TATCGACTAC CGGCAGCACG GGGAAAATGC TTATGGCGCA
TTGGGGTTGG ATTCGTATCG CAAGCGATGG CTTCTTCTTA AAAATGGATG GTACCGAAAA
AACGTACTCG TGCTTGCGAG CGTTTGCTTG CTCAGTAAAG AGCAACAGAA AATCATCGAT
GCAGTGAAGC GTTGGTATTT TAGAGATAGA TTTTTTTTGC TGTCAAAAGT TTGGTCATTC
CGTCGACGCC CGATCGAAAA AGTATGCGTT GGAATTTTGA TTGTGCTCGG ACTCTTTTGA
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| Protein sequence | MIRVAVLLAT HNGSKWIEAQ IDSILNQIGV EVQIFVSDDR SSDNTLAILD DFARDERVSR
LERVDAGYGS PAANFFRLLL EAPIEVDFEY VFLSDQDDYW LPNKIISAIQ EMQLNKADCY
ASDLICTYPD GARRFLKKSY PQTKNDYLFQ GASAGCTYGL SARAAVTFRD IIGRLGDAVR
KDISHDWAIY AVTRSHGFQW TLDARAYIDY RQHGENAYGA LGLDSYRKRW LLLKNGWYRK
NVLVLASVCL LSKEQQKIID AVKRWYFRDR FFLLSKVWSF RRRPIEKVCV GILIVLGLF
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