| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1931 |
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| Symbol | |
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| ID | 7971110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2065447 |
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| End bp | 2066685 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644792530 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943844 |
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| Protein GI | 239814934 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.210708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCTGA CATGGGGGGA GACCCCTAGG GTTTCAGGGG TTTTTGGATC TCAAGCAATT
GGCCAATTTG TAGCCAATAG TGAGGCTATG CCCGAGTCAA AGTTTTTCTT TGTATCGGCT
GTCCCATTGC TGCACAGTGG GCTTGTGCGG GAGCGAGCAG CATACTTTAA AGAAAAAAAC
GAAGTAAGAA AAAGATTGAA GGGCATTCCG TTTTTTACGC TGCCGATCTA TGCGCCGCAG
AACTTTGTGT TCTCCAGTAG GCATTCCTTT CGCACGATGC ACATTGGAGC GAGCTGGCAC
TTGGCGAGAT TACTGCGAAG AATTGATCCC GATGTAGTCC ACTGTAGGTC GTACCACGCA
ACATATGCGG CACTCCAACT CAGAGAGCGC CTCGGGAAAA AATATAAAGT GATATTTGAT
GCGAGAGGAG TTTGGTCTGC AGAAGTTGCT CTCAAAAGGA ATTTCCCAGA AGAAGGAAAA
AACTACAAAT TTTTGCTAAA TCTTGAAAAA TGGATAGTCG AGAAATCGGA TGCGACGATT
TCTGTTTCCC CTCAAATGGG TAGGTATTTT GAGAATCTCG GCTGCAATAG GTCGGCATGT
ATTTATCTCA GTGCCCCGGT TGATAAGTTT GAAAAATTAA GTAGTAGTGC GCCGAAAGAA
AAGGAGCCGC AAGCTATTGC CTTGGTTTAC CTGGGAACCT TGGGTGTGGA TACGTGGCAC
AAGCCAAGCG AGCTCGTCGC GCTATACAAG CATCTCGTCG CGCTAGTAGG GCGCGTGCGA
CTAAAAATCA TCACAATGTC AAACCATGGT GCGCTTCTCA AGCAGCTAGA GGCCTTGGGA
CTTTGTGATG TTGAAATTGT CTCTACAAAA TCTATTGAAG AGCTTGCGGC TGAATTGGGC
GGCATGGATA TCGGCGTGCT CTCCTATTTT AAGCCAAAAA CAAAAAATGA GAGACTATTA
TCGAGCGTCG TGATGGCGGT AAAAACCGCA GAGTATCTGG CGGCAGGATT GCCAATCTTG
GTGAATAAGT ATTGCGGTGG TGCGGCGGAG GTGGTTTCAA CCAATTCAGT GGGAATTGCG
TACAACCCAG ATACGTTCGA AGAAATAACT GAACACGCAC TTAATTCGCT GCGAACTGGA
GGCGCTCAAC AACGATCTGT TTTCATTGCA AAGGATTTAT TTGATCGTTC CGCAAATGCT
CAGCGATATG CCAAGACTTA TCGGCAGGTC GTTTCCTAA
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| Protein sequence | MYLTWGETPR VSGVFGSQAI GQFVANSEAM PESKFFFVSA VPLLHSGLVR ERAAYFKEKN
EVRKRLKGIP FFTLPIYAPQ NFVFSSRHSF RTMHIGASWH LARLLRRIDP DVVHCRSYHA
TYAALQLRER LGKKYKVIFD ARGVWSAEVA LKRNFPEEGK NYKFLLNLEK WIVEKSDATI
SVSPQMGRYF ENLGCNRSAC IYLSAPVDKF EKLSSSAPKE KEPQAIALVY LGTLGVDTWH
KPSELVALYK HLVALVGRVR LKIITMSNHG ALLKQLEALG LCDVEIVSTK SIEELAAELG
GMDIGVLSYF KPKTKNERLL SSVVMAVKTA EYLAAGLPIL VNKYCGGAAE VVSTNSVGIA
YNPDTFEEIT EHALNSLRTG GAQQRSVFIA KDLFDRSANA QRYAKTYRQV VS
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