| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1915 |
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| Symbol | |
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| ID | 7971094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2048869 |
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| End bp | 2049765 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792515 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002943829 |
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| Protein GI | 239814919 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACATCG AAGAGCTGCG GACCTTCGTG GAAGTTGCCG ATGCCGGCGG GGTTTCGTCT
GCTGCGCTGC GGCTTGGGGT GTCCAAGTCG ATCGTCAGCC GCCGCCTCTC CAGGCTTGAA
GAGGAGCTTG GGGTGCAACT GCTTGCGCGG TCCACCCGCG GGGCTGCCCT CACCGAAGCC
GGGGCCACGT TCCGGGACCA TGCAGCCAGG GTCTGCGCCG AGATCGACGT GGCCAGGGAA
GCGATCCTGC CCGCCGGCGA CCTTCGTGGG CGCTTGCGTG TTGCTGCGCC GTTTTCACTG
GGCCCGACCC ACTTCGCGCC CATCCTTGCG GAGATGGCAC GACGGCACCC CGGGCTTCAC
ATCCAGACCT GCTACAGCGA CCGCTTCGTC GATCTCATCG CGGAGGGCTA CGACTGTGCG
ATACGGATCG GCTATCTCCC GGACTCCAAC CTGATTGCAA GACGCATCGG CCCGGTGCAT
GGAAAGCTCG TTGCGAGTCC GGCCTATGTC AAGGCGCATG GATCGCCCGA GACACCGGAG
GAGCTCCTCG CTCATCAGGC CCTCATGCAG GGAACCGAAG CCTGGCACCT CACGGATGGC
GACAAGACCA TCACGGTTCG CCCGCAAGGG CGCTTCAAGG CCGACAACGG CACGGCGCTG
GTCGCCGCTG CCACGGCAGG ACTGGGCATC GCCTACCTGC CCGATTGGCT CACCCATGAA
CATGTGGCCT CCGGGGCACT GGTGCCGGTC ATGACGCGTC ATCCGCCACC GCCGGCAGGT
GCCTATGTCG TCCGGCCGCC CGGCCAGCAT CCCGCACGGA AGATCCGGGT CCTCACCGAA
CTGCTGATCG AGTATTGCGA CCAGCCTGCG CATCCTGTGG GAGCTGCCGC GGTTTGA
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| Protein sequence | MDIEELRTFV EVADAGGVSS AALRLGVSKS IVSRRLSRLE EELGVQLLAR STRGAALTEA
GATFRDHAAR VCAEIDVARE AILPAGDLRG RLRVAAPFSL GPTHFAPILA EMARRHPGLH
IQTCYSDRFV DLIAEGYDCA IRIGYLPDSN LIARRIGPVH GKLVASPAYV KAHGSPETPE
ELLAHQALMQ GTEAWHLTDG DKTITVRPQG RFKADNGTAL VAAATAGLGI AYLPDWLTHE
HVASGALVPV MTRHPPPPAG AYVVRPPGQH PARKIRVLTE LLIEYCDQPA HPVGAAAV
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