| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1911 |
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| Symbol | |
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| ID | 7971090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2043477 |
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| End bp | 2044325 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792511 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002943825 |
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| Protein GI | 239814915 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCG AAGTCGAATT GGCAGCCGTC CTGCGGCCTC GCGACGCCGC GCCGGCGCGG
CCACTGCTGC CCTGGCGCCG CATCGGCCGT CTCGGTGAAG GCGCCCTGCC CTGGCTCCTG
CCCATCGCCC TGCTCGCGCT GTGGTTCACG GGCGCCGAGC AGGGCTGGAT CTCGCCGCAG
GTGCTGCCGC CGCCGCAGTT CGTGTGGGAA ACATTGCGCG ACCTGGCCAC GAGCGGCGAC
CTGTGGCTGC ACGTGAGCAC CAGTTTCAAC CGCGTGGGCG TCGGCTTCGC GGCCGGCACT
TTGCTCGGAC TGGCGCTGGG CTCGGCCATG GGCCTGTCGC GCAGCTTCGA GACCTATGTG
CTGCCCAGCT TCAATGCGCT GGTGCAGATC CCGGTGCTGG CCTGGCTGCC TTTCGTGCTG
CTGATCGTGG GCATTGGCGA GCCGCTGAAG TACATCCTCA TCGCCAAGGC GGCACTGGTG
CCGGTGGCGC TCAACACGCT GCAGGGCTTC CGCCAGACCC CGTCCGCGCT GCGCGAAGTC
GGCCAGGTCT ATGGCTATAC GCGGCGCCAG CAGGTGCTGG AAATCGTGCT GCCGCACGCC
GTGCCCACGC TCTTCACCGG CGTGCGGCTG GGCTTCACCA AGGCCTGGCT CTCGCTGGTG
GTGGTGGAGC TGGTGGCGTC GAGCGAAGGG CTGGGCTACC TCATCGTCTA TGGCCGGCAG
CTGTTCCAGC TCGACCTGGT GATGGCGGCG GTGATCGTGG TGGGCGTCAT CGGCTATGCC
ATCGACCGCT TGCTCGATCG GCTCGAAACC TCGATGCGCC GGCGCGAGCC GGGCGGAGCC
GCGCCATGA
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| Protein sequence | MSAEVELAAV LRPRDAAPAR PLLPWRRIGR LGEGALPWLL PIALLALWFT GAEQGWISPQ
VLPPPQFVWE TLRDLATSGD LWLHVSTSFN RVGVGFAAGT LLGLALGSAM GLSRSFETYV
LPSFNALVQI PVLAWLPFVL LIVGIGEPLK YILIAKAALV PVALNTLQGF RQTPSALREV
GQVYGYTRRQ QVLEIVLPHA VPTLFTGVRL GFTKAWLSLV VVELVASSEG LGYLIVYGRQ
LFQLDLVMAA VIVVGVIGYA IDRLLDRLET SMRRREPGGA AP
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