| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1907 |
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| Symbol | |
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| ID | 7971086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2039116 |
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| End bp | 2040336 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792507 |
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| Product | Acyl-CoA dehydrogenase type 2 domain protein |
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| Protein accession | YP_002943821 |
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| Protein GI | 239814911 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.740935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCCAC CACCCCCTGC CTACGAGCAG CTCGCCGAGC GCTTCCGCCC CGTCTTCGCC
CGCATCGCCG AACATGCCGC CCAACGCGAG AACGAGCGCG TACTGGCCTA CGACGCCGTC
ACCTGGCTGC GCGAAGCGAA CTTCGGCGCG CTGCGCGTGC CGCGGGTCCA CGGTGGCCTT
GGCGCTTCGG TCGAGCAACT GTTCGACCTG CTCATCGAGC TTGGCGCCGC CGATTCGAAC
CTGCCGCAGA TCCTGCGCGC GCACTTCGGC TTCATCGAAC GGCTCTATGC AGAGATCGAT
CCCGAGCTGC ATGCCCCCTG GCTGCGGCGC GCGGCCGACG GCGCGATCTT CGGCAATGCC
ACTACCGAGT TGGGCGAGGC CGAGCTGGGC ACGCTGCAAA CCACGCTCAC GCGCGACGGC
AAGGGCTGGC TGCTCGATGG CGACAAGTAC TACAGCACAG GCACGCTCTA TGCCGACTGG
ATTCCCGTGA CCGCGCAGCG CGCTGACGAC CCGAGCAAGC AAGGCCGGGT ACTGGTGCTC
GTGCCCGCGG AGGCGCGCGG CGTGGAACGC ATCGACGACT GGCGCGGCTT CGGCCAGCGC
CTGACCGGGT CGGGCACCAC GCGCTTTCGC CGTGTCGCTG TCGAGGCCGG CAATGTGCTG
ACCTACGACC GCGACCGGCC GACGCCGCTC ACGGCCCATT TCCAGCTCAC CCACCTGGCC
ACGCTGGCCG GCATCGCGCG CGCGATCGAG CGCGACGCGG TCGCCTTCGT GCAGCCGCGC
AAGCGCGTGT ACAGCCACGG CAGCGGCACC ACGCCGCGGG AAGATCCGCT GGGCCAGCAG
GTGGTGGGGC AGCTTTCCAG CGCGGCCTTC ACGGCCGCCG CAACGGTGGC TGCAGTGGCC
CGCGGGCTGG GCGACATCGA CCGCCTGCGC CAGCGCGGCG AGCCCGTTCC CGAAAGCCTG
CTCGTCGACG TGGAGCTGCG CACCGCCAAG GCGCAGGTCG GCATCATCGA CACCGTGCTG
AATGCCGCGA CGCGGCTGTT CGATGTCGGC GGCGCCTCGG CGCTGCAGGA AGACCGGCGG
CTGGATCGCC ACTGGCGCAA CGCGCGCACG CTGGCCTCGC ACAACCCGGT GATCTACAAG
GCGCGCGCGG TCGGCGACCA CGCGATCAAC GGAACCCGGC CGACCTTCTA TTGGGCAGTG
GGAAGCCGGG CCGAAAGTTG A
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| Protein sequence | MPPPPPAYEQ LAERFRPVFA RIAEHAAQRE NERVLAYDAV TWLREANFGA LRVPRVHGGL
GASVEQLFDL LIELGAADSN LPQILRAHFG FIERLYAEID PELHAPWLRR AADGAIFGNA
TTELGEAELG TLQTTLTRDG KGWLLDGDKY YSTGTLYADW IPVTAQRADD PSKQGRVLVL
VPAEARGVER IDDWRGFGQR LTGSGTTRFR RVAVEAGNVL TYDRDRPTPL TAHFQLTHLA
TLAGIARAIE RDAVAFVQPR KRVYSHGSGT TPREDPLGQQ VVGQLSSAAF TAAATVAAVA
RGLGDIDRLR QRGEPVPESL LVDVELRTAK AQVGIIDTVL NAATRLFDVG GASALQEDRR
LDRHWRNART LASHNPVIYK ARAVGDHAIN GTRPTFYWAV GSRAES
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