| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1895 |
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| Symbol | |
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| ID | 7971074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2026970 |
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| End bp | 2028592 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644792496 |
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| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain protein |
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| Protein accession | YP_002943810 |
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| Protein GI | 239814900 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGCGA GAGATTTCGA GCGGCAGCTT CTTTCGGGGA GCGACGGCTC CGACAGGCAT
CAGGCCGATG TCCTGGTGAT CGGCGGCGGC CCGGCGGGCG CATGGGCCGC GGTGAGCGCG
GCCGCGCAGG GCGCGCGCGT GCTGCTGGCC GACAAGGGCT TCTGCGGCAC CTCGGGCGCC
ACCGCGCCCT CGGGCACTGG GCTGTGGCAC GTGCCGCCGG ACGGCTCGGC GCGCGAAGAG
GCCAAGGCCA GCCGGCTCGC CATGGGTGGC CACCTCGCCG AGCATGCCTG GATGGACCGG
GTGCTCGAGC AGACCTGGGC CAACGTCGAG CGGCTCAAGG AATGGGGCTA TCCGTTCCCC
GCCGACGACC AGGGCGCACT GCGCTGCACT TCGCTGCAAG GTCCCGAATA CATGCGGCTG
ATGCGCAAGC GGGTGAAGGA AGCGGGCGCG CGCATCCTCG ACCACAGCCC GGCGCTGGAA
TTGCTGGTGG ACGAGCACGG CACCGTCTGC GGCGCCACCG GCGTGAACCG CCAAAGCGGC
AGCACCTGGG TGGCGCGTGC CGGCGCGGTC GTCATCGCCA CCGGCGGCTG TGCCTTCCTG
AGCCGGGCGC TCGGCTGCAA TGTGCTCACC GGCGACGGCC AACTGATGGC GGCCGAGGTC
GGCGCGGCGC TGTCGGGCAT GGAGTTCTCG AACGCCTACG GACTGGGGCC GGTCTTCTCG
TCGGTCACCA AGTCGCTGTT CTACAACTGG GCGACCTTCT ACACGGCCGA CGGCTCGGCC
ATCGAAGGCG CGGGTTCCTC CAAAGGGCGC GGCGTCATCG CGCAGACGCT GCAATCGCAA
CCTGTGTTCG CCTGCCTCGA CCGCGCCGAC GCACAGATCC GCGCATGGAT GCGCATGGCG
CAGCCCAACT TCTTCGTCTC CTTCGACCGC CAGGGCATCG ATCCGTTCAC GCAGCACTTT
CCGGTGACGC TGCGGCTCGA AGGCACGGTG CGCGGCACGG GCGGCCTGCA CCTGGTGGAC
GACAGCTGCG CCACCTCCGT GCCCGGCCTC TACGCCGCGG GGGATGCGGC AACGCGCGAG
CTGATCTGCG GCGGCTTCAC AGGCGGCGGC AGCCACAACG CGGCCTGGGC CTTGTCCTCC
GGGTTCTGGG CCGGCGCAGG CGCGGCGGCC TTCGGACGCG ACGCGCGCGC TGTGGGTTCC
AACCGCACGG CCTTGCGCGC CGGCGGCGTG GCGCTTTCCT CGCGCGGCGC CGCGGCCTTC
GACAGCCAGG AAGTGATTCG CGCCGTCCAG GCGGAAGTCT TCCCCTACGA GCGCAACTGG
TTCCGCGAGG GCGATGCGCT GCGCGATTCA CTCGCACGGC TCGATGCCCT CTGGACCCGC
CTGCGCACCA GCGCGCCGGC TGCCACGGCG ACAGAGGCTG TTCGCGCACG CGAAGCCGCC
GCCATGCTGG CCACCTCGCG CTGGATGTAC CGCAGCGCCT TGCAGCGCAC CGAAACGCGC
GGCATGCACC GCCGGCGCGA ACACGGTGCG GCCGACCCGG CGCAGCGCCA CCGGCTGCTC
AGCGGCGGGC TCGACGAGGT CTGGGTGCAG CGCCATGCCG TGCGGGACGA GGTGGCCGCA
TGA
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| Protein sequence | MGARDFERQL LSGSDGSDRH QADVLVIGGG PAGAWAAVSA AAQGARVLLA DKGFCGTSGA
TAPSGTGLWH VPPDGSAREE AKASRLAMGG HLAEHAWMDR VLEQTWANVE RLKEWGYPFP
ADDQGALRCT SLQGPEYMRL MRKRVKEAGA RILDHSPALE LLVDEHGTVC GATGVNRQSG
STWVARAGAV VIATGGCAFL SRALGCNVLT GDGQLMAAEV GAALSGMEFS NAYGLGPVFS
SVTKSLFYNW ATFYTADGSA IEGAGSSKGR GVIAQTLQSQ PVFACLDRAD AQIRAWMRMA
QPNFFVSFDR QGIDPFTQHF PVTLRLEGTV RGTGGLHLVD DSCATSVPGL YAAGDAATRE
LICGGFTGGG SHNAAWALSS GFWAGAGAAA FGRDARAVGS NRTALRAGGV ALSSRGAAAF
DSQEVIRAVQ AEVFPYERNW FREGDALRDS LARLDALWTR LRTSAPAATA TEAVRAREAA
AMLATSRWMY RSALQRTETR GMHRRREHGA ADPAQRHRLL SGGLDEVWVQ RHAVRDEVAA
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