| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1882 |
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| Symbol | |
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| ID | 7971061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2013499 |
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| End bp | 2015718 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644792484 |
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| Product | Rhodanese domain protein |
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| Protein accession | YP_002943798 |
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| Protein GI | 239814888 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0607] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGA GCGAACTGTC CGTCGAAACC GCGGGAAACG ATGTTGCCAG TGAACGCGCG
CGCGCCGTCG AAGCCTTCCT CGCGCAGGTC CGAAGCCTGC TGCTTCCCGG CGCAGCCGCC
TCCCACGACA CGCTGCAGCC CGTGGCCGAT GCGCTGGTCC GGCTGGGGCA GCGCCGCGCG
CTGTTTCCGG CCGCTCACTT CCCGGTCGAT GCCGAGCACC CCGCGCAGGT CTACCGGCTG
GCCGAGGACG CCGACGGCGG CTTCGCGCTG TACCTGTCGG CCGGGCTGGC AGGCAAGGCC
CAGCCGCCGC ACGACCACAC GACCTGGGCG GTGATCGCCG GCGTGGAGGG CAGCGAACGC
AACGAGCTCT ACCGCCGCGA GAAGACGGGC GACCCCGCGC GCGATGCGCT GGTACACCAA
CGCACCGTCG ACGTGGCCGC CGGAAGCGCC GTCGTGCTGC TGGCCGACGA CGTGCACACC
ATCGAGCTGG TCGGCGGCCA GGACGGGCGC CACCTGCACT TCTACGGCCG CGCGCTCGAG
CTGCTCGACG AGCGCGTGGT GTTCGAAGGC GCGGCGGGCG GCAGCTATCG CCAATTCGCG
GCGCCGAAGA ACATCCGCCA TCCGGCGATC ACGCCGCAGG CACTGAAGGC CGCCTTGTCC
GACGGCGAGG AGATCGCGCT GCTCGACGTG CGCGAAGCCG GCGTCTTCGT GCGCAGCCAC
ATCCTGCTTG CGGCCTCGGC GCCGCTGTGG CGGCTGGAAG TGCTGATCGA CCGCCTCGTG
CCGCGCCGCA GCACCCGCAT CGTGCTGGCC GATGCCGACG AATCGCTCGC GCACCAGGCC
GCTGCCAAGC TCGTGCGCCT GGGCTGGCGC AACGTGTCGG TGCTGGCCGG CGGCACGCAG
GGCTGGGCCG CCGCGGGCTA TGAACTCTTC AGCGGCAGCA ACGTGCCGAG CAAGGCCTTC
GGCGAAGTCA TCGAGCACCG GAAGCACACG CCGTGGATCT CGGTCGACGA ACTGCACGAG
CGCGTGGAGC GCGGCGACGA CATCGTGGTG GTCGACAGCC GCACGCCGGA GGAATTTGCC
GACTTCAGCC TGCCGTTCGC CCACAGCCTG CCGGGCGCCG AGCTGGTCTA CCGCATCCAG
GCGCTCGCGC CGCGGCCCGA GACGCTGGTG GTGGTCAACT GCGCTGGCCG CACGCGCAGC
ATCGTGGGTG CGCAGACGCT CATCGACGCG GGCATTCCCA ACCCGGTGGT CTCGCTCAAG
GACGGCACCA TGGCCTGGCT GCTGGCGGGC CGCAAGCTCA GCCATGGCCG CGCGGCGCCG
CTGCCCGAGC CGGACGCGCA CGCGCGGCAG CAGGCCCGCG CCCGTGCCGA GAGCGTGGCG
GCGCGCGCAG GCGTGCGCCG CATCGATGCG GCCACCTTGG CGCGCTTCGA AGCCGAGGCC
GGCGAGCGCT CGCTCTACCG CTTCGACGTG CGCACGCGCC AGGAATACGA GGCCGGCCAT
CTCGAAGGCT GGCGCTGGGC GCCCGGCGGC CAGCTGGTGC AGGCCACCGA CGAATACGTG
GGCACCCGCC GCGCTCGCAT CGTGCTGGCC GACTGGGACG GCGTGCGCGC GCTGACCACC
GGTGCATGGC TCGCGCAACT GGGCGGGCGC GAGGTGTTCG TGCTTTCACC GCCGGCCTTG
CCGGTGCTGG TGCTCGGCCC CGAAGCCGTG CGCGTGCTGC AGCTGCGCAC GGGCGCACCG
CAGATCGCGC CGCGCGAAGC CGCCGCCGCG CTCGAGGCCG GCACGGCGGT GGTGTTCGAC
GTGGAGCGGC GGTCGGCCTA CGAGCGCCGG CATGTCGCGG GTGCGCGCTT CTCGGTGCCC
GACCGGCTGC AGGAGTTCAT CGCCGACCTG CCTGCATCGC AGCGCATCGT GCTCACCTCG
TCGGACGGCG TGCTCGCGCG CATCGTGGCC GCGGAATTGG CTGCGCGCAT CGGCCGCGAG
GTCCACGCGC TCGCGGGCGG CACGCAGGCC TGGGCCGCCG CGCGGCTGCC CACGGGCAGC
GGGCCCGAGG GCGTGCTGAC GGGCGACGAT GACCATGGGT ACAGCCCCTA CGCACACGCC
GACCTTGCCA GGCGCGACGC CGGCTTCAAG CAGTACCTGG ACTGGGAGGT GGGCCTGGTG
GCGCAGCTCG AGCGCGAGGG CGACGTGGGC ATCCGCCTCG TCGAGCCGGC CTCGGCCTGA
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| Protein sequence | MSLSELSVET AGNDVASERA RAVEAFLAQV RSLLLPGAAA SHDTLQPVAD ALVRLGQRRA
LFPAAHFPVD AEHPAQVYRL AEDADGGFAL YLSAGLAGKA QPPHDHTTWA VIAGVEGSER
NELYRREKTG DPARDALVHQ RTVDVAAGSA VVLLADDVHT IELVGGQDGR HLHFYGRALE
LLDERVVFEG AAGGSYRQFA APKNIRHPAI TPQALKAALS DGEEIALLDV REAGVFVRSH
ILLAASAPLW RLEVLIDRLV PRRSTRIVLA DADESLAHQA AAKLVRLGWR NVSVLAGGTQ
GWAAAGYELF SGSNVPSKAF GEVIEHRKHT PWISVDELHE RVERGDDIVV VDSRTPEEFA
DFSLPFAHSL PGAELVYRIQ ALAPRPETLV VVNCAGRTRS IVGAQTLIDA GIPNPVVSLK
DGTMAWLLAG RKLSHGRAAP LPEPDAHARQ QARARAESVA ARAGVRRIDA ATLARFEAEA
GERSLYRFDV RTRQEYEAGH LEGWRWAPGG QLVQATDEYV GTRRARIVLA DWDGVRALTT
GAWLAQLGGR EVFVLSPPAL PVLVLGPEAV RVLQLRTGAP QIAPREAAAA LEAGTAVVFD
VERRSAYERR HVAGARFSVP DRLQEFIADL PASQRIVLTS SDGVLARIVA AELAARIGRE
VHALAGGTQA WAAARLPTGS GPEGVLTGDD DHGYSPYAHA DLARRDAGFK QYLDWEVGLV
AQLEREGDVG IRLVEPASA
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