Gene Vapar_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1868 
Symbol 
ID7971046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1999989 
End bp2000417 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content72% 
IMG OID644792469 
ProductAIG2 family protein 
Protein accessionYP_002943784 
Protein GI239814874 
COG category[S] Function unknown 
COG ID[COG2105] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCAAT CTCCCGGGCC CGATGTCGCG CCGGACGCAG GCGCGCAGCG CCACGTCTTC 
GTCTACGGCA CCCTGCGCCG CGGCGGGCGC AACGACATCG CGCGCTATCG GCCCGTGCCG
GTCCACGTGG CCGACGCAAG CATTGCCGCC ACGCTGTACG ACCTCGGCGC CTACCCCGGC
GCGGTGCTCG GCGGGCAGCG GCGCGTCTTC GGCGAGATCT ACCGCGTCGC GCCCCAGGTG
GAGGCCGAGC TCGACCGGCT CGAGGGCGTC GCCGACGACG GCTCCGGCGA ATACATCCGC
CGCCACCTGA TCGTGGCAGC AGGTGCGCAG CGTTTCGAAT GCCTGGTCTA CGAGATCCAT
CCATCGCGCA TCGAGGGGCG CGCGGTGATC GACAGCGGCG ACTGGATGGC CCATGCCGCT
GCCAGCTGA
 
Protein sequence
MPQSPGPDVA PDAGAQRHVF VYGTLRRGGR NDIARYRPVP VHVADASIAA TLYDLGAYPG 
AVLGGQRRVF GEIYRVAPQV EAELDRLEGV ADDGSGEYIR RHLIVAAGAQ RFECLVYEIH
PSRIEGRAVI DSGDWMAHAA AS