| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1867 |
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| Symbol | |
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| ID | 7971618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1999023 |
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| End bp | 1999949 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792468 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002943783 |
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| Protein GI | 239814873 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACACCG CTGCTCCCGC CAGCCGCCTG CTGGCCTATG GTTGCCTGGC CCTGAGCATG
TCGCTCGTCG GCGGCTACGT CGCCCTCTCC AAGCCGCTGG TGGCGGCCTT CCCGGTGCTG
TTGCTCGCCT GGCTGCGCTT CGGCATCGCG GCGCTCGCCA TGCCGCACTG GCTGCGGCGC
GCTCCGGGCG AACCGCCGAT GAGTGCACGC ACGCGCGGGC TGGTCTTTCT CGAATCGTTC
CTCGGCAACT TCCTGTTCTC GATCTGCATG CTGTTCGGCG TGAGCCTGAC CAGCGCGGTG
TCCGCCGGCG TGATCATGGC TTCGATCCCG GCGGCCGTGG CGGTGGCGAG CTGGCTCTTC
CTGCGCGAGC GCATCACGGT GCGCATCGGC CTGGCCATAG GCTGCGCTGC GATCGGCATC
GGCCTGCTGG CCCTGACGCC CGCGCATGCA CCGGCAGCGG GCGACAACGG CGCCGCCGCG
CCTTCGATGC CTTGGCTCGG CAATCTGCTC GTGTTCTGCG CGGTGCTGTG CGAAACCGCC
TATGCGGTGA TCGGCAAGTC GCTCACCGGC CGGCTCGGCC CCAAGCGGAT CTCCTCGCTC
ATCAACCTCT GGGGCTTCGT GCTGTCGATG CCCTTCGGCA TCTGGTTTGC GCTGCAGTTC
GACTTCACGG CGGTGCGCCT CGGAACCTGG GCACTGCTCG TGGTCTATGC GCTGGCCGCG
AGCATCTGGA CCGTGTGGCT CTGGATGACC GGATTGCGCC ATGTGCCCGC TGCGCAAGCG
GGCGTGTTTG CCGTGATGCT GCCCGTGAGC GCGGCCCTCG TGGGCGTGCT GGTGCTCGGC
GAAAGCCTCT CCGCGGCGCA GCTGCTTGCG TTCGCTCTTG CACTCGTTGG CGTGGTGCTG
GCGACCTGGC CCGCGCGCCG AAGCTGA
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| Protein sequence | MNTAAPASRL LAYGCLALSM SLVGGYVALS KPLVAAFPVL LLAWLRFGIA ALAMPHWLRR
APGEPPMSAR TRGLVFLESF LGNFLFSICM LFGVSLTSAV SAGVIMASIP AAVAVASWLF
LRERITVRIG LAIGCAAIGI GLLALTPAHA PAAGDNGAAA PSMPWLGNLL VFCAVLCETA
YAVIGKSLTG RLGPKRISSL INLWGFVLSM PFGIWFALQF DFTAVRLGTW ALLVVYALAA
SIWTVWLWMT GLRHVPAAQA GVFAVMLPVS AALVGVLVLG ESLSAAQLLA FALALVGVVL
ATWPARRS
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