| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1849 |
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| Symbol | |
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| ID | 7970866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1981177 |
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| End bp | 1982019 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792450 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002943765 |
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| Protein GI | 239814855 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.976253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGCG CCGTTTCACT CCCTTCCCCG GTCACCAGCG TCGCCTCGCT CACGCCGCAT
CTCTACGCAC CCGACGCGGT CAGGCCGTTG CGCGCCAAGG AACATTTCCT GAGCGCCGAC
ACCTTCGTCG AGCTGCACCA GCACCCGTGG CCGCAGCTCA CTTTCTCGAC CCGCGGCGTG
ATCCGGCTCA GCACGCAGGA CGGCAGCTAC ATCGTGCCGC CCTCGCGCGC GGTCTGGGTG
CCGGCCAACA TGCCGCACAG CATCATGCTG ATCGAGGACG CCGAGCTGCG CACCGTGTAC
CTGCATGCCT GGCTCGGCCC GCCGTGGGAG AAGTGCGAGG TGCTCGAGAT CAGCCCGCTG
CTGCGCGCGC TGATGCTCGC ACTCGACACC ACGCCCGACG GCCTGCCGCC GGCCGACCCG
CACGCGCCGC AGCGCGAACG CATGATCGCC CCGCTGCTGG TGGACGAGCT CGAGCGCGCC
ACGCAGATCC GCATCGACGT GCCGCTGCCC TCCGACAAGC GGCTGCGCCA GCTGTGCGAG
ACGCTGCTGC GCAACCCGGC CGACCGCGCC ACGCTGGCCG AGCGTGCCGC TGCCATCGGC
GCCAGCGAGC GCACCGTGGC GCGGCTGTTC CGCGACCAGC TCGGCATGAG CTGGCAGCAA
TGGCGGCAGC AGGCCGTGAT GGCGCATGCG CTGCCGCTGC TGGCGCGCGG CATGGCCGTG
AGCCAGGTGG CGGCGGCCAG CGGCTATGCC ACCGACAGCG CGTTCTGCGC CATGTTCAAG
GCCGCCACCG GACGCTCGCC CACTTCCTTC CAGCACAAGA AGCGATCCGC CGCGCTCGCC
TGA
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| Protein sequence | MPSAVSLPSP VTSVASLTPH LYAPDAVRPL RAKEHFLSAD TFVELHQHPW PQLTFSTRGV
IRLSTQDGSY IVPPSRAVWV PANMPHSIML IEDAELRTVY LHAWLGPPWE KCEVLEISPL
LRALMLALDT TPDGLPPADP HAPQRERMIA PLLVDELERA TQIRIDVPLP SDKRLRQLCE
TLLRNPADRA TLAERAAAIG ASERTVARLF RDQLGMSWQQ WRQQAVMAHA LPLLARGMAV
SQVAAASGYA TDSAFCAMFK AATGRSPTSF QHKKRSAALA
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