| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1803 |
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| Symbol | |
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| ID | 7970820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1939228 |
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| End bp | 1939635 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792404 |
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| Product | protein of unknown function DUF336 |
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| Protein accession | YP_002943719 |
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| Protein GI | 239814809 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.632219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGACCA AGTCCTTCCT CGAACTCGCC GATGTCAAGG CCATTGCCGC CGCTGCCGAA
GCCGAGGCCC TCAAGAACAA CTGGGCCGTG ACCATCGCCA TCTCCGACGA TGCCGGCAAC
CTGCTGTGGC TCCAGCGCCT GGATGGCGCC GCGGCACTGT CGTCCCACAT CGCGCCCGCC
AAGGCGCACA CCGCAGCCAT GGGCCGCCGC GAGAGCAAGG TCTACGAAGA CATCATCAAC
GGCGGCCGCA GCGCGTTCCT CACGGCGCCC GCGGTTCAGG GCCTGCTCGA GGGCGGCGTG
CCCATCGTGA AGGACGGCCA GGTGATCGGC GCCGTCGGCG TGAGCGGCGT GAAGTCGAAC
GAGGACGCCC AGATTGCCAA GGCAGGCATT GCAGCCCTCG GTCTTTGA
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| Protein sequence | MKTKSFLELA DVKAIAAAAE AEALKNNWAV TIAISDDAGN LLWLQRLDGA AALSSHIAPA
KAHTAAMGRR ESKVYEDIIN GGRSAFLTAP AVQGLLEGGV PIVKDGQVIG AVGVSGVKSN
EDAQIAKAGI AALGL
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