| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1775 |
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| Symbol | |
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| ID | 7974517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1910057 |
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| End bp | 1911424 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792374 |
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| Product | protein of unknown function DUF195 |
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| Protein accession | YP_002943691 |
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| Protein GI | 239814781 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACACTT CCCTGATTCT TCTTCTGCTG GCCGCCCTTG CGGTGGTCCA GCTGGTGCTC
GCGGTCTGGC TGCTGGCACG CCGCCAGCCG GCGCCCGACC ACAGCGAACT GCTCGCCGTG
CTGTCCGCCA TGGGCACCGC CAACGAACGC ACCGAGCGCG AACTGCGCCA TGAAATCGGC
GAAAGCTCGC GCGGCGCGCG GCAGGAAACC GCGCAGGCCT TCGCCACCTT CCAGCAGGCG
CTGGTGCAGC AGGGCGCCGA AGCCACCCGC ACGCAGAACG CGCAACTCGA TGCCTTCTCG
CTGCAGCTCG CCTCGCTGCA GAAGACCCTG GCCGACACGC TCAACACCCA GCTGCAGGGC
CTGAGCGAAT CCAATGCGCG CCGCCTGTCG GAAGTGCGCG CGACCATGGA AGCGCAGCTC
GCGCAGCTGC AGCAGAGCAA CACCGCCAAG CTCGACGAGA TGCGCAAGAC CGTCGACGAG
AAGCTGCAGA GCACGCTCGA AGCCCGCCTC GGCGAGAGCT TCAAGCAGGT GGCCGACCGG
CTCGAGCAGG TGCACAAGGG CCTGGGCGAG ATGCAGACGC TGGCCGTCGG CGTCGGCAGC
CTGCAGCGTG TGCTGACCAA CGTGAAGACG CGCGGCGTGT TCGGCGAGGT GCAGCTCGAG
GCGCTGCTCG AGCAGGTGCT CACGCCCGAG CAGTACGCCA AGCAGATCGA GACCAAGCCG
CGCAGCGGCC AGCGCGTGGA CTTCGCGATC CGCTTCCCTG GCCGCGGCGA CGACGGCGCC
CCGGTGTGGC TGCCGATCGA CGCCAAGTTT CCGCGCGACG ACTACGAGCG CCTGATCGAT
GCGCACGAGC GCGCCGACGC GCCCGGCGCC GAGCTCGCGG CCAAGGCGCT CGAGGCGCGC
ATCCGCGTGG AGGCCCGTTC GATCGCCGAG AACTACCTGG CGGCGCCGCA CACCACCGAC
TTCGCCATTC TTTTCCTGCC GGTCGAAAGC CTCTATGCCG AGGTGCTGCG CCGCCCGGGC
CTGATGGACG CCATCCAGCG CCAGCACCGC GTGACGCTGG CCGGCCCCAC GACCCTGCTT
GCCATGCTCA ACAGCCTGCA CATGGGCTTT CGCACGCTGG CGCTGGAGCA GCAGGCCTCC
GAGGTCTGGA AGGTGCTGGG CGCGGTCAAG ACCGAGTTCG AGCGCTACGG CGAATGGGTT
TCGCGCATCA AGGAGCAGGT GGCCAAGGCC TCCGACACGC TCGACAAGGC CGACACGCGC
GCCAAGCAGA TGCGCCTGGC GCTGCGCAAG GTCGAGGCGC TGCCCGAGGC AGAGGCGCAG
GTGCTGCTGC CTCCCACCGC AGACAGCGAG GGCGACGACA CCCCGTGA
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| Protein sequence | MDTSLILLLL AALAVVQLVL AVWLLARRQP APDHSELLAV LSAMGTANER TERELRHEIG
ESSRGARQET AQAFATFQQA LVQQGAEATR TQNAQLDAFS LQLASLQKTL ADTLNTQLQG
LSESNARRLS EVRATMEAQL AQLQQSNTAK LDEMRKTVDE KLQSTLEARL GESFKQVADR
LEQVHKGLGE MQTLAVGVGS LQRVLTNVKT RGVFGEVQLE ALLEQVLTPE QYAKQIETKP
RSGQRVDFAI RFPGRGDDGA PVWLPIDAKF PRDDYERLID AHERADAPGA ELAAKALEAR
IRVEARSIAE NYLAAPHTTD FAILFLPVES LYAEVLRRPG LMDAIQRQHR VTLAGPTTLL
AMLNSLHMGF RTLALEQQAS EVWKVLGAVK TEFERYGEWV SRIKEQVAKA SDTLDKADTR
AKQMRLALRK VEALPEAEAQ VLLPPTADSE GDDTP
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