Gene Vapar_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1770 
Symbol 
ID7974512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1905509 
End bp1905925 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content61% 
IMG OID644792369 
Producthypothetical protein 
Protein accessionYP_002943686 
Protein GI239814776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0625368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC ACCTGCTCAT GCTCGCTCTT GCATCCACCT GCTTCATGGC CACCCAGGCG 
GGCGCCATGA CCAAGGACGA ATACAAGGCG GCCAAGGAAA AGATCGAGGC CGACTACAAG
TCCGCCAAGG CCCAGTGCGA CGCGATGAAG GACAACGCGA AGGACGTCTG CCAGAAGGAA
GCCAAGGGCA CGGAAGACGT GGCGAAGGCC GAACTCGAAC AGCAGTACAA GCCGAGCGAC
GCCCATGCCC GCAAGGTGGC CGAGGAGAAG GTCAAGGCCA CGTACGAAGT CGCCAAGGAA
AAATGCGACG ACCAGTCCGG CGATGCCAAG GCTGCCTGCG TGAAGCAGGC CAAGGCCGAC
GAGGCCCAGG GCAAGGCCGA GATCAAGGCC ATGAAGAAGA CGAAGACGGC CATGTAG
 
Protein sequence
MKKHLLMLAL ASTCFMATQA GAMTKDEYKA AKEKIEADYK SAKAQCDAMK DNAKDVCQKE 
AKGTEDVAKA ELEQQYKPSD AHARKVAEEK VKATYEVAKE KCDDQSGDAK AACVKQAKAD
EAQGKAEIKA MKKTKTAM