| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1755 |
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| Symbol | |
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| ID | 7974497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1889834 |
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| End bp | 1890751 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644792354 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002943671 |
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| Protein GI | 239814761 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGACC TCGACCTCAC CACGCTCCGC CTCTTCGTCG CCGTCTGCGA GACCCGCAGC
ATCGCGCGTG CGGGCGAGCA GGCCAGCATC GTCGGCTCGG CCATCAGCAA GCGCCTGGCC
CAGCTCGAGG ACGCCGTCGG CACGCCGCTG CTGCTGCGCA AGCGCCGCGG CGTGGTGCCC
ACGCCCGCCG GCGAAACGCT GCTCGAGCAT GCGCGCGCGA TGCTCGGCAG CGCCCACCGC
ATCGAGCGCG ACATGGCCGC CTATGCAGGC GGCGCGCGCG GGCATGTGCG CATCCTGGCC
TCGGCCTCGG CGCTGGCCGA ATCGCTGGCC GAGGACGTGG CGAACTTCCT GCAGAACCCC
GCGCACCGCA ACATCCGCGT CGACATGGAA GAGCGCGTCA GCCCCGAGAT CGTGCGCGGC
ATCCGCGAGG GCAGCGCCTC GATCGGCCTG TGCTGGGACG CGGCCGACCT CGAGGGCCTG
CAGCGGCGCG ACTACCGCAC CGACCACCTC GCGATCGTCG CGCACCCCTC GCATCCGGCG
GCGCGCCACG GCCAGGTGCG CTTCGAGGAC GTGCTCGGCC ATGAATTCGT CGGCATGCCC
GCGCTGAGCG CCGTGCAGCT GATGCTCGCG CGCGAAGCGG CGGTGGCGGG CAAGCCGCTG
GTGTACCGCG TGCTGGTGTC CAACTTCGAT GCCGCCCTGC GCGTGGTGCG GGCCGGGCTC
GCGATCAGCG TGGTGCCGGC CGAGGTGGCG CGGCCCTTCA CCGACACCTA CGGGCTGCGG
CTGATGCCGC TCGCCGATGC CTGGGCGCGC CGCCGATTCG CGATCTGCTT TCGCGACGAA
GCGGCGCTCT CGCCGTCGGC GCAACTGCTG GTGGCGCATC TCGAACGGTG CGCGACCGAG
CGCGAGGTCG CTGGGTGA
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| Protein sequence | MRDLDLTTLR LFVAVCETRS IARAGEQASI VGSAISKRLA QLEDAVGTPL LLRKRRGVVP
TPAGETLLEH ARAMLGSAHR IERDMAAYAG GARGHVRILA SASALAESLA EDVANFLQNP
AHRNIRVDME ERVSPEIVRG IREGSASIGL CWDAADLEGL QRRDYRTDHL AIVAHPSHPA
ARHGQVRFED VLGHEFVGMP ALSAVQLMLA REAAVAGKPL VYRVLVSNFD AALRVVRAGL
AISVVPAEVA RPFTDTYGLR LMPLADAWAR RRFAICFRDE AALSPSAQLL VAHLERCATE
REVAG
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