Gene Vapar_1751 details

Gene Information

• Locus tag: Vapar_1751
• ID: 7974493
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 1885630
• End bp: 1886334
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644792350
• Product: ABC transporter related
• Protein accession: YP_002943667
• Protein GI: 239814757
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.657614
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAAC TGCTGCGCAT CGAGAACCTG AGCGCCGGCT ACGGCGAGGC CGTGGTGCTG 
CACGACGTGG CCTTCGCGCT CGGCGAAGGC CAGACGCTGG CGCTGCTGGG CCGCAACGGC 
ACGGGCAAGA CCACGCTGAT CAACACGCTG GCGGGTGCGA CGCGGCAGCA CGGCGGGAGC 
ATCTCGCTGG CTGGACTGGC GCTGCACAAG CTGGCGCCGC ACCAGCGCGC GGCGGGCGGC 
ATCGGCTGGG TGCCGCAGGA GCGCAACATC TTCAAGTCGC TCACGGTGCA CGAGAACCTC 
ACGGCGGTCG AGCGGCCCGG CAAGTGGAAC CCGCAGCGCG TCTACGAGAT GTTCCCGCGC 
CTGGCCGAGC GCAAGACCAA CCTGGGCACG CAGCTGTCGG GCGGCGAGCA GCAGATGCTG 
GCCGTGGGCC GCGCGCTGGT GCTCAACCCG AAGCTGCTGC TGCTCGACGA GCCGCTCGAA 
GGGCTGGCGC CGATCATCGT GGAAGAGCTG CTGCGCGCCA TCCGCCGCAT CACGCAGGAC 
GAGGGGCTGG CCGCGATCAT CGTGGAGCAG CATCCGCAGG CGATCCTCGC GATTTCCGAC 
CACGCCGTGG TGCTCGACCA CGGGACCATC GTGCATGCCG ACAGTGCCGC GGCATTGCGC 
AGCCAGCCTC AAGTGCTCGA ACGCTTGCTG GGCGTGGCGC GCTAG 

 

Protein sequence

MSELLRIENL SAGYGEAVVL HDVAFALGEG QTLALLGRNG TGKTTLINTL AGATRQHGGS 
ISLAGLALHK LAPHQRAAGG IGWVPQERNI FKSLTVHENL TAVERPGKWN PQRVYEMFPR 
LAERKTNLGT QLSGGEQQML AVGRALVLNP KLLLLDEPLE GLAPIIVEEL LRAIRRITQD 
EGLAAIIVEQ HPQAILAISD HAVVLDHGTI VHADSAAALR SQPQVLERLL GVAR