Gene Vapar_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1744 
Symbol 
ID7974486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp1878575 
End bp1879240 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID644792343 
ProductGlutathione S-transferase domain protein 
Protein accessionYP_002943660 
Protein GI239814750 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.662899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCC AGATCTATTC CGCCCCCCTC AGCATGTTCG GCGCCAAGGT GCAGATCGCC 
GCGCTCGAAA AAGGCGTCGA TTTCGAACTG GTGATGGTGC CCTTCACCAA GGACGACACC 
TACGAGCCCA AGCACCCCGA GGTGCTGCGC GTCAATCCCG TGAAGCAGCA GGTGCCGATC 
CTGATCGACG GCGATGTCGA GCTGTTCGAT TCGACCCAGA TCTTCGAGTA CCTCGAAGAC 
CGGTATCCGA GTCCTGCGCT GTGGCCCCGC GGCATTGCCG AGCGGGCCCG CGCGCGGCAG 
CTCGAGCAGA AGTCGGACGA GGTGTTCTTC CCCAACGTGA TCCGGCTCTT CGGCCTGCAG 
CACGACATGC AGAGCGCGCC CGCCGTGGCG GCCTGCGCCG CCTGCGCGCG CTACTACGAG 
GAAATGGAAG GCCTGCTGGC CACGCGCGAA TACCTCGCTG GCCCCTACTC CTTCGCCGAC 
ATCGCCTTCT ACATGGCGCA TGTGTTCGCC GACCGCAAGG GCGCCGGCAT GACCGGTGCC 
ACGCCGCGGC TCGTGGCCTG GCGCGGCCGC GTGGGCGAGC GGCCCGCAGT GCGCGCGGCG 
GTCGATCCGA TGATGCGCTT CCTGGCCTCC GAGGGTCGCG GTGTGCCGGC CTTCCTGCAA 
CGCTGA
 
Protein sequence
MKTQIYSAPL SMFGAKVQIA ALEKGVDFEL VMVPFTKDDT YEPKHPEVLR VNPVKQQVPI 
LIDGDVELFD STQIFEYLED RYPSPALWPR GIAERARARQ LEQKSDEVFF PNVIRLFGLQ 
HDMQSAPAVA ACAACARYYE EMEGLLATRE YLAGPYSFAD IAFYMAHVFA DRKGAGMTGA 
TPRLVAWRGR VGERPAVRAA VDPMMRFLAS EGRGVPAFLQ R