| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1734 |
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| Symbol | |
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| ID | 7974476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1866050 |
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| End bp | 1867075 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792333 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002943650 |
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| Protein GI | 239814740 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.614615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGACA TCCTCACGCT GAGCCAGATG CAGATGTTCG TTGCCGTGGC GGATGCCGGC
AGCTTCCGTG CCGGCGCGGC CCGGCTGCAC CGGGTGCAGT CGGCCGTGAG CCATGCCATT
GCCAATCTCG AGGAACAGCT CCAGGTGCGG CTCTTCGACC GTTCCGGCCA CAAGCCGGTG
CTCACGCCCA CGGGCAAGGC ACTGCTGGGC GACGTGCGGG TGATCCTGTC GAAGGTCGAG
GCGCTGCGCT CGCGCGCGCA GGGGCTCGAA CAGGGCATCG AGCTCGGGCT GGCAGTTGCG
GTGGACACGC TCTTTCCGCC GAACCTCCTG GCCAGCGCGC TGCGTGGCAT GCATGCGGTC
TACCCGAGCA TTGCCATCCG CGTGGAATAC AGCTCGATGG GCGGCACCGT CGATGCCTTG
AATTCGGGCC GATGCGATCT CGCCATTGCG GCCTTCGGCC ATGCCGACGA AAAAATCAGC
CGCGAATTCC TCATGCAGCT TCATACCGTG GCCGTTGCCG CGCCGTCGCA TGCGCTGGCG
GTCCATGCGG GCCGGCGCGG TGCGGGGGGC CTGGATGCCG CCGCGGCGGA GCACGTGCAG
ATCGTGGTGG AAGATCCGAG CACGCTCAGC CAGGGCTACG ACATCGATGT GCTCTCGCCC
TCGACCTGGC GCGTGACCGA CATGTACATC AAGCTCGCGC TGCTGCGCGC GGGCCTGGGA
TGGGGAAAGA TGCCGTCGTG GCTGGTGGCC GGCGACCTGG CCGCCGGAAC GCTGGTGCAG
TTGCCGGTGA GCCGCATCGG CCCCGGCGGT GGAACCAGCC AGCAGTGCCA TTTCTGCCAC
CGCGGCGACA AGACGCTGGG AGCGGGCGCT ACGCTGCTGC GCGAATGCCT CATGGGAGAA
GCGAAGGCGG CGGCGCCCGG CGCCGGCGGC GCATCAGCAT CTCCACGAGC TCGAAGATCC
CCTCGCTCAG CAACGCCAGC GCCGCGGCCG GCAGCGCGCC GGCCAGCAGC AGCTCGCGGT
CGTTGA
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| Protein sequence | MLDILTLSQM QMFVAVADAG SFRAGAARLH RVQSAVSHAI ANLEEQLQVR LFDRSGHKPV
LTPTGKALLG DVRVILSKVE ALRSRAQGLE QGIELGLAVA VDTLFPPNLL ASALRGMHAV
YPSIAIRVEY SSMGGTVDAL NSGRCDLAIA AFGHADEKIS REFLMQLHTV AVAAPSHALA
VHAGRRGAGG LDAAAAEHVQ IVVEDPSTLS QGYDIDVLSP STWRVTDMYI KLALLRAGLG
WGKMPSWLVA GDLAAGTLVQ LPVSRIGPGG GTSQQCHFCH RGDKTLGAGA TLLRECLMGE
AKAAAPGAGG ASASPRARRS PRSATPAPRP AARRPAAARG R
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