| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1726 |
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| Symbol | |
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| ID | 7974468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1857529 |
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| End bp | 1858362 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792325 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_002943642 |
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| Protein GI | 239814732 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000145035 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACGT CCCATCAAGC CCCCCACACC CCGCTCCACC GGATTCTGCT GACCGGCGCC
GCCGGCGGAC TGGGCAAGGT CCTGCGCGAA CGCCTGCGCC CCTACGCCCG GATCTTGCGC
CTTTCCGACA TTGCCGCCCT CTCCCCTTCC GAGGGCGCGC ACGAAGAAGT CGTGCCCTGC
GATCTTTCGG ACAAGGCCGC GGTCCACGCA CTGGTCGAGG GCTGCAGCGC CATCGTGCAC
CTGGGCGGCG TTTCGGTCGA GCGGCCGTTC GAGGAAATCC TCGAAGCCAA CATCAAGGGC
GTCTTCAACG TCTACGAAGC CGCGCGCCGC CACGGCGTGA AGCGCGTGGT GTTCGCAAGC
TCCAACCACG TGATCGGCTT CTACAAGCAG AGCGAGCATA TCGACGCCCA CGCCCCGCGC
CGGCCCGACG GCTACTACGG CCTGTCGAAG TCCTTCGGCG AGGACATGGC GCAGTTCTAT
TTCGACCGCT GGGGCATCGA GACGGTGAGC ATCCGCATCG GCTCGTCCTT TCCCGAGCCG
CTCAACCGCC GGATGATGAG CACCTGGCTC AGCTACCGCG ACCTGACCAC GCTGCTCGAA
AAGTCGCTCT TCACGCCCGG CGTGAAGCAC ACGGTGGTCT ACGGCATGTC CGACAACCGC
GACGTCTGGT GGGACAACAG CGCCGCCGCC CACCTGGGCT TCGTGCCGCA GGACAGCTCC
GAGGTGTTCC GCGACAAGGT CGAGGCGCAG CCGCCCGTGG CGCCGACCGA TCCCAACGCC
ATCTACCAGG GCGGCGCCTT CACGGCACAG GGACCGTTCG GCGATGCAGG CTGA
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| Protein sequence | MSTSHQAPHT PLHRILLTGA AGGLGKVLRE RLRPYARILR LSDIAALSPS EGAHEEVVPC
DLSDKAAVHA LVEGCSAIVH LGGVSVERPF EEILEANIKG VFNVYEAARR HGVKRVVFAS
SNHVIGFYKQ SEHIDAHAPR RPDGYYGLSK SFGEDMAQFY FDRWGIETVS IRIGSSFPEP
LNRRMMSTWL SYRDLTTLLE KSLFTPGVKH TVVYGMSDNR DVWWDNSAAA HLGFVPQDSS
EVFRDKVEAQ PPVAPTDPNA IYQGGAFTAQ GPFGDAG
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