| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1723 |
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| Symbol | |
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| ID | 7974465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1854983 |
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| End bp | 1855471 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792322 |
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| Product | Tripartite ATP-independent periplasmic transporter DctQ component |
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| Protein accession | YP_002943639 |
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| Protein GI | 239814729 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00467009 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACACCA AACTTTGCCG CACCCTCGCC CGTGCCTGCA TGTGGTTGGG CATCCTCGGG
CTCGTCGCGG TGATCTGCGC CGTGAGCTGG CAGGTGTTCG GCCGCTACGT GCTCAACAAC
ACCCCCACCT GGGCTGAAAG CCTGGCGCTG CTGCTGGTGC TCTACGTCAC GATGTTCGGC
GTCGCCGTCG GCGTGCGCGA CGCGGGCCAC ATCGGCCTCG AATCCTTCCT CGTGCTCGCG
CCCGACTGGC TGCGGCTGAA GATGGAATAC CTGATCCACG CACTGATCCT CGTGTTCGGC
CTGGCCATGG CCTGGAATTG CGCCTCCCTC GCCGAATCGG TGTGGGACTA CCGGCTGCCC
ACGCTCTGGA TCTCCGAGGG CTGGAAATAC GTGCCCGCCT CCGTGGCCGG CGTTCTCATC
GTGATGTTCT CCATCGAACA CATCATCGCG CTCGCCCAAG GCCGCGAAGT CGAACCCGCC
TGGGCCTGA
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| Protein sequence | MYTKLCRTLA RACMWLGILG LVAVICAVSW QVFGRYVLNN TPTWAESLAL LLVLYVTMFG
VAVGVRDAGH IGLESFLVLA PDWLRLKMEY LIHALILVFG LAMAWNCASL AESVWDYRLP
TLWISEGWKY VPASVAGVLI VMFSIEHIIA LAQGREVEPA WA
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