Gene Vapar_1704 details

Gene Information

• Locus tag: Vapar_1704
• ID: 7974772
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 1833825
• End bp: 1834463
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644792303
• Product: Glutathione S-transferase domain protein
• Protein accession: YP_002943620
• Protein GI: 239814710
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0625] Glutathione S-transferase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0690203
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGGC TCTACGACTA CGCCCTGTCG GGCAACTGCT TCAAGGTGCG GCAGATGCTT 
GCCTGGCTCG GCCTCGACTA CCAGCGCGTG CCGGTCGACT TCCATCCGGG CCGCGAGCAC 
CGGTCGGCCG CGTTCCTGGC AGAGGTCGAT CCGCTGGGCC AGCTTCCGGT GATCGACGAC 
GACGGCTTCT TGCTGCGCGA CGCGCAGGCC ATCCTCGTCT ATCTCGCGAG CAAGCACGAC 
GCCGAGGGCC GCTGGTACCC CGCCGATCCG CAGCTGCGCG GCCAGGCCGC GATGTGGTTT 
GCCATGGCCG ACGAGCTCAC CCGCACCGCC TCGGCCGCGC GGCTGCACGA CGCCTTCGGC 
TACGAGAACA TCGACATCGA GGCCTGCCGG CGCGGCGCGC ATGCGGCCTT CCGCCTGCTG 
GACGACCATT TGGCCGAGCG CGCCAGCGAG GGCCGCCAGT GGCTGGCCGG CCCGCATGCG 
ACCGTGGCCG ACCTGGCCTG CTTTCCCTAT GCGGCCCTCG CTGGCGAAGG CGGCATTTCG 
CTGGACGAAT ACCCCGCCCT GCGACACTGG ATCTGGAACT TTCGCCACCT GCCCGGCTTC 
ATCGGAATGT CGGGTATCTT TGCCGCCGGG GCGGCCTGA 

 

Protein sequence

MIRLYDYALS GNCFKVRQML AWLGLDYQRV PVDFHPGREH RSAAFLAEVD PLGQLPVIDD 
DGFLLRDAQA ILVYLASKHD AEGRWYPADP QLRGQAAMWF AMADELTRTA SAARLHDAFG 
YENIDIEACR RGAHAAFRLL DDHLAERASE GRQWLAGPHA TVADLACFPY AALAGEGGIS 
LDEYPALRHW IWNFRHLPGF IGMSGIFAAG AA