| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1675 |
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| Symbol | |
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| ID | 7974743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1806591 |
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| End bp | 1808012 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644792274 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943591 |
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| Protein GI | 239814681 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.525082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGTA CCGAAAGCCT TGCCGCGGCC GCCGCCTATT TCGACGACGG CGGCTTCTTT
GCCGACCTGC AGCGGCGCGT CGCCTTCCGC ACCGAGAGCG ACACCGGCGC CGCCACGCCC
GCGCTCGGCG CCTACCTGCG CGACGAGCTG GTGCCGCCGC TGGCCGCGCT GGGCTTCGAA
TGCGAGATCG TCGAGAACCC GGTGGCGGGC GGCGGGCCCT TCCTGATCGC GCGCCGCATC
GAAGACCCCG CATTGCCCAC CGTGCTGAGC TATGGCCACG GCGACGTGGT GAGCGGGCAG
GACGCGCAGT GGGACGAAGG CCTCGGCCCC TGGGCGCTCA CCGTGCGCGG CGACCGCTGG
TACGGGCGCG GCACGGCCGA CAACAAGGGC CAGCACGGCA TCGCGCTCGG CGGGCTGGCG
GCCGCACTGC GCGCGCGGGG CGGGCGCCTG GGCTACAACA TCACCTGGCT CATCGAGACC
GGCGAAGAGG CCGCGTCGCC GGGCCTGCAT GCGGTGTGCG AGCAGCAGCG CGAGCGGCTG
CGCGCCGACC TGTTCATCGC GAGCGACGGG CCGCGCGTGA GCGCCGCGCG GCCCACGCTG
TTCCTGGGCT CGCGCGGCGC CGTCAACTTC AGCCTGCGGC TGCGCGCCAG GGCGCGGGGC
TACCACTCGG GCAACTGGGG CGGCGTGCTC GCCAATCCTG CCACCGTGCT GAGCCATGCG
GTGGCCTCGC TGGTGGATGC GCGCGGGCGC ATCCTGGTCG AGGCCTTGCG GCCGGCTGGA
ATTCCGCAGG GCGTGCGCGA GGCGCTGGCC GATATCGCCA TCGGTGGCGG CGCCGACGAT
CCCGCGCTCG ACGACGGCTG GGGCGAGCCC GGCCTCCGCC CGGCCGAGCG GCTGGTGGCG
TGGAACACCA TCGAGGTGCT CGCGCTCGGC GCCGGCTCGC CGCAACGGCC CGTCAATGCG
ATTCCGTCCG AGGCGGTGGC GCATTGCCAG CTGCGCTTCG TGGTCGGCAC GCCGTGGCGC
GAGCTCGCGA GCATCGTGCG CGCCCACCTC GATGCGCATG GCTTCGGCGA TGTGGAAGTG
AAGGTCACGC TGGAAGGCGC GGCGACGCGG CTCGACGTGG AGAACCCCTG GGTCGACTGG
GCCCGGCGCT CCATCGAAAG GAGCAGCGGC CAGCGCGTCG ACCTGCTGCC CAACCTCGCG
GGCTCGCTGC CCAACGACGT CTTTGCCGAC CTGCTGGGCC TGCCCACGCT GTGGGTGCCG
CATTCGTACC CGGCCTGCGC GCAGCACGCG CCCAACGAGC ACCTGCTGGC GCCGCTGGCG
CGCGAGGGCC TGCAGATCAT GGCCGGCCTC TACTGGGACC TGGGCGAGCC AGGCCTGGCT
CCCTGGGCCG CTGGAAAAAC GCAGCACACC GCTGCCGCCT GA
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| Protein sequence | MQRTESLAAA AAYFDDGGFF ADLQRRVAFR TESDTGAATP ALGAYLRDEL VPPLAALGFE
CEIVENPVAG GGPFLIARRI EDPALPTVLS YGHGDVVSGQ DAQWDEGLGP WALTVRGDRW
YGRGTADNKG QHGIALGGLA AALRARGGRL GYNITWLIET GEEAASPGLH AVCEQQRERL
RADLFIASDG PRVSAARPTL FLGSRGAVNF SLRLRARARG YHSGNWGGVL ANPATVLSHA
VASLVDARGR ILVEALRPAG IPQGVREALA DIAIGGGADD PALDDGWGEP GLRPAERLVA
WNTIEVLALG AGSPQRPVNA IPSEAVAHCQ LRFVVGTPWR ELASIVRAHL DAHGFGDVEV
KVTLEGAATR LDVENPWVDW ARRSIERSSG QRVDLLPNLA GSLPNDVFAD LLGLPTLWVP
HSYPACAQHA PNEHLLAPLA REGLQIMAGL YWDLGEPGLA PWAAGKTQHT AAA
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