| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1659 |
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| Symbol | |
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| ID | 7974727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1792629 |
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| End bp | 1793642 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644792258 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943575 |
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| Protein GI | 239814665 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0392] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCATG ACGCGACCAC GCTTTCGGCG GCGGACCATC CGGCCGGCCG GCTGTCGCTG
TGGCGCCGCA GCCGCCGATG GCTGCTGCCG CTGCTGGGGC TCGTGGTGCT GGGCCTGCTG
CTGTCGCATG CGCACAAGGT CGACTGGGCC GGCGCGTGGG AGGCGCTGCA GCGCTATCCG
GCGATGCTGC TGCTGGGGGT GTGGGCCATC ACGACCGCCA GCCATGCGCT CTACGGATGC
TTCGACCTCA TCGGCCGGCG GCACACGCGC CACCGCGTGC CGCGCTGGCG CACCTGGGCC
ATCGCGGTGA CGAGCTATGC CTTCAACCTC AACCTGGGCT CGCTGGTCGG CGGCATCGGG
ATGCGCGCCC GGCTCTATGC GCGCGCCGGC CTCGATGAAG CCGTGGTGGC GCAGATCGTC
GGCGTGAGCC TGGCCACCAA CTGGCTCGGC TACGGGCTGC TGGCCGGCGG CCTGTTCGCC
GCGGGCATCA TCACGCCGCC GCGCCAGGCC AGCATCGGGG CGGACGCGTT GCGCGCACTG
GGCGTGCTGA TGATCCTTCT TGCGGCGGCG TACGTGGCGG CCTGCGCCTT TTTGCGCGGG
CGGCAGTGGC AGCTGAGGGG GCGGCGGGTG AGGCTCCCTT CGGCACGGCT TGCGGTCGTC
CAGCTCACGC TCTCCACCGC CAACTGGGCA TTGATGGGCT GCGCGATGTA CCTGCTGCTG
GGCCGGCAGG TGCCCTACGC CACCACGCTG AGCGTGCTGC TGGCCGCGTC CATCGTCGGC
GTGATCACGC CGATCCCGGC CGGGCTCGGC GTGCTCGAGG CCGTGTACCT GGCGCTGCTC
TCGGGCACCG TGCGCCAGGG CGCGCTGATG GGGGCCGTGC TGGCCTACCG CGCGCTCTAC
TACCTGCTGC CGCTGGCCGG CGGCCTGGTG CTCTACCTGC TGCTCGAACG CTACGCGGCA
AGCCACCCGC TGGACACGGA GGCCGACACA CCATGGCGCG CGCAAACCCC CTGA
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| Protein sequence | MNHDATTLSA ADHPAGRLSL WRRSRRWLLP LLGLVVLGLL LSHAHKVDWA GAWEALQRYP
AMLLLGVWAI TTASHALYGC FDLIGRRHTR HRVPRWRTWA IAVTSYAFNL NLGSLVGGIG
MRARLYARAG LDEAVVAQIV GVSLATNWLG YGLLAGGLFA AGIITPPRQA SIGADALRAL
GVLMILLAAA YVAACAFLRG RQWQLRGRRV RLPSARLAVV QLTLSTANWA LMGCAMYLLL
GRQVPYATTL SVLLAASIVG VITPIPAGLG VLEAVYLALL SGTVRQGALM GAVLAYRALY
YLLPLAGGLV LYLLLERYAA SHPLDTEADT PWRAQTP
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