| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1642 |
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| Symbol | |
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| ID | 7974710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1775721 |
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| End bp | 1776689 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792242 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002943559 |
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| Protein GI | 239814649 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.520921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAGC GTTCAGAAGG CCTCTTCTGG GCGCGGGGCA TCAAGGTCCG GCACCTGGAG
TCCTTTCTGG TGCTGGACGA GGCGGGCACG CTGACCGAGG CGGCGGCGCG GCTGCACATG
ACGCAATCGG CCATGTCGCA CTGGCTGGCA GAGCTGGAAC GCGTGGCGGG CACGCCGCTG
GTGGTGCGTG GGCGCAAGGT GCAGCTGACG CCTGCGGGGC ATCTGCTCAA GCGGCTGGCC
ATCACCGTGC TGGGTGACAT CGCCCGCACC GGCCGCGAGA TGCATGCGGT GGCCGCGGGG
CGGGTGCCGC GTCTGAACGT GGGCAGCGTC TGGGCCGGCA TTGCCGGCGG CCTGCCCGAA
GCCGTGACCG CGTTCCAGCA GCGCCATGCA GATGTGGCCG TGTCCATCCA CGACGGGCTG
TTCGACGACC TGCTCAAGGG CCTGGACACA CGTGCCATGG ATGCCGTGAT CGGTGTTCTG
GATGCAAGGG CGCACCAGCC GCAGCTGGCG CATCACGTGC TCTTCGACGA CCAGGTGAGC
ATCGTCATCG GCCAGGGCAG CAAACACTGG CACAGCAACC AGCCGCTGGG CTTTGCCGAC
GTGCTGCGCG AGCAATGGGT GATGCCGCCC CTGGGCACGC TCACTCGCAT CCAGATGGAT
GCCTATCTCA TCGAGCAACA AGCATCGTGG CTGGTGCCCA AGGCGGAAAC CGCCTCGCTG
GCCATGATGC AGGCGCTGCT GCAAAAGGGC GACTATGTCG GCGTGTGTGC GGAATCCATG
GCGGACTACA TGGCCTCGCT GGGGCTGTTC CGGAAGGTCG CCATTGATTC GAACATCCGC
TTCGGCCCGA TCACCGTGGT GTGGAACCGC GAGCATGTCT CGGCCACGCT CATGGACTTC
ATTGCTTGCC TCAAGGCGCA TGCGCGGGGC TTGCCTGCCG CGCCAGTGCA GGCGCCGCCC
GGCGCGTAG
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| Protein sequence | MIERSEGLFW ARGIKVRHLE SFLVLDEAGT LTEAAARLHM TQSAMSHWLA ELERVAGTPL
VVRGRKVQLT PAGHLLKRLA ITVLGDIART GREMHAVAAG RVPRLNVGSV WAGIAGGLPE
AVTAFQQRHA DVAVSIHDGL FDDLLKGLDT RAMDAVIGVL DARAHQPQLA HHVLFDDQVS
IVIGQGSKHW HSNQPLGFAD VLREQWVMPP LGTLTRIQMD AYLIEQQASW LVPKAETASL
AMMQALLQKG DYVGVCAESM ADYMASLGLF RKVAIDSNIR FGPITVVWNR EHVSATLMDF
IACLKAHARG LPAAPVQAPP GA
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