| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1640 |
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| Symbol | |
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| ID | 7974708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1772913 |
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| End bp | 1774544 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792240 |
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| Product | gamma-glutamyltransferase |
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| Protein accession | YP_002943557 |
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| Protein GI | 239814647 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0405] Gamma-glutamyltransferase |
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| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG AAGCCATGGT GGTCTGCCCA CAGCCGGAGG CCGCCGAATC CGGCATCGAC
ATCCTGCGCG CAGGCGGCAA CGCGGTGGAC GCCGCCGTGG CCACCGCGCT GGCGCAGACG
GTGGTCGATC CGCTGATGTG CGGCATCGCA GGTTTTGGTA CGGCCGCCGT GTACCTGCCC
GGCGCCCAGG TGCACGAATA TTTCGACTTC CACTCGCCCG CGCCGCTGGC GGCCAGGGAA
GACATGTGGG AGCACCTGCT GGAGGGCGAG ACCAAGGACG GCTTCGGTTT CATCCTCAAG
GGCCGCGTCA ACGACATCGG CCCCCAGTCT ATCGGCACGC CGGCCACGCT CAAGGGCCTG
GAGGCCATGC ACCAGGCGCA CGGCCGCTTG CCTTGGCGGC AGGTGGTGGA GCCCGCCATC
CGGTGGGCCG CGGACGGCTA CTTCGTGCGC CCCGGCATGC ACGCCTTCTG GATCGACGAG
CCCAGCATGG GCCGCGTCGG CAACCTGGAG CGCCTGCAGT ACTGCGAGGA CAGCCGCCAG
CTGTACTGCC GCCCCGACGG CCGTCCCAAG CCCATCGGTG CGCCGCTGCG CAACGAAGGC
ATGGCCGCCG TGCTGCGCCA GATTGCCGAG GAAGGCGCGC GCCCGTTCTA CCAGGGCGAC
CTGGCGCACA AGATGGTGGC GCACCTGCAG TCGCTGGGCG CGCTGATCAC GCACGAGGAC
CTGGCCCGCT ACCAGGTGCA GCGCAACGCG CCGCTGGTGG GCCACTACCG CGACCGCACC
ATCACGACCA ACCAGCCCCC GGGCGGCGGC GCCATGCTGC TGGAGATGCT CAACATCCTC
GAGCACTTCG ATCTGGCGAG CCTGGAGCAC AACAGCCCCG ACTATCTGCA GACGGTGTGC
GAGGCCATGA AGAAGGCGAC GATCGACAAG GACCGCTGCA TCGGCGACCC GAAGTTCTTC
GACGTGCCGC TGGACCGGTT GCTGTCCAAG GACATGGCCC GCGAAGTGGC CGAGCAGATC
CGCACAGGCC ATCGCTTCAG CGTAGAGCGC GTGAACCCCG GCGCGCCCGT GCCGCGCGAC
ACCACCCACC TGAGCGTGGT GGATGCTGAC GGCAACGCCG TGTCCCTGAC CCACTCGCTC
GCCATGCCCT CGGGCATCAT CACCCCGGGC ATGGGCTTCC TCTACAACGG CTGCATGGGC
GTGTTCGACC CGCGCCCGGG CCGCGCCGGC AGCATCCAGC CGGGCAAGAG CCGCTTCACC
TCGTCCTGCC CCACCATGAC CTTCAAGGAC GGCGAGCTCG ACGTGGTGCT CGGCGCACCG
GGCGGCACGC AGATCGCGAT GGGCGTGCTG CAGGTGCTGC TCAACGTGAT CGACCACGGC
ATGGAAATGC AGGTCGCCGT GTCGGCGCCG CGCTTCTCGT CCACCAGCAA CGCCATCGAC
GTGTGCAACC GCATTCCGCG CTCCACCACG CGCACACTGG AAGCACAGGG CTACGCCATT
GGCCGCAACC CATACAACTA CACCATCGGC TGGGTGCACG GCGTGCAAGT ACAGGCCGAT
GGCCTGCACG GCGGCGCCGA CCCCGGCCGC GATGGCGTGG CATACCGGCT GCGCATGGAT
CCTGCGCACT GA
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| Protein sequence | MKKEAMVVCP QPEAAESGID ILRAGGNAVD AAVATALAQT VVDPLMCGIA GFGTAAVYLP
GAQVHEYFDF HSPAPLAARE DMWEHLLEGE TKDGFGFILK GRVNDIGPQS IGTPATLKGL
EAMHQAHGRL PWRQVVEPAI RWAADGYFVR PGMHAFWIDE PSMGRVGNLE RLQYCEDSRQ
LYCRPDGRPK PIGAPLRNEG MAAVLRQIAE EGARPFYQGD LAHKMVAHLQ SLGALITHED
LARYQVQRNA PLVGHYRDRT ITTNQPPGGG AMLLEMLNIL EHFDLASLEH NSPDYLQTVC
EAMKKATIDK DRCIGDPKFF DVPLDRLLSK DMAREVAEQI RTGHRFSVER VNPGAPVPRD
TTHLSVVDAD GNAVSLTHSL AMPSGIITPG MGFLYNGCMG VFDPRPGRAG SIQPGKSRFT
SSCPTMTFKD GELDVVLGAP GGTQIAMGVL QVLLNVIDHG MEMQVAVSAP RFSSTSNAID
VCNRIPRSTT RTLEAQGYAI GRNPYNYTIG WVHGVQVQAD GLHGGADPGR DGVAYRLRMD
PAH
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