| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1617 |
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| Symbol | |
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| ID | 7974846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1747050 |
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| End bp | 1748171 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792217 |
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| Product | chorismate mutase |
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| Protein accession | YP_002943534 |
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| Protein GI | 239814624 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase |
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| TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCT CCGCTCCAAC ACCGCCCTCC TCTCCCGACA ACTCCGAAAG CCTTGCCGAT
CTGCGCGTGC AGATCGACTC GCTCGACCAG CAACTGCTCG GCCTGCTCAA TGAGCGGGCC
CACGTGGCAG AGCTGGTGGG CGAGGTCAAG AAGCGCGAAG GCACCCCGTA TTTCCGCCCC
GACCGCGTGG CCCAGGTCAT CGAGAAGATG CAAAAGAGCA ATGCGGGCCC GCTCAAGGAC
CTGCATGTGG CCGCCATCTG GCGCGAAATC ATGTCGGCCT GCCTGGCGCT CGAATCGCCG
CAGCGCGTCG CCGTGCTCGG TCCCGAGGGC ACCTTCTGCG AGCAGGCGGC CATCGAATAC
TTCGGCGGCG CGGCCGACCT GATCTACTGC GCCAGCTTCG ACGAGGTGTT CCACGCCACG
GCGGCCGGCA GCGCCCAGTA CGGCGTGGTG GGCGTCGAAA ACTCGACCGA AGGCGTGGTC
ACGCGCTCGC TCGACCTGTT CCTGCATTCG CCGACCCACG TGGTGGGCGA AGTCAGCCTG
CTGGTGCGCC ACCATCTGCT GCGCAGCAGC AACTCGCTCG AGGGCATCGA GGCCGTGCTG
GCCCACCCGC AGGCGCTGGC GCAGTGCCAG ACCTGGCTGT CGAAGCACCT GCCCAATGCC
GAGCGGCGTG CCGTTTCGAG CAACGCCGAA GGCGCGCGGC TCGCGGCCAC CAACCCGGCC
TGGGCCGCGC TGGCCGGCGA ACGCGCCGCC ACCCGCTTCG GCCTGCACAT CGTGGCGCAT
GCAATCCAGG ACGATTCGTA CAACCGCACG CGCTTCTCCG TGATCTGCCT GCCGCAGACG
CTGGCCATGC CGCCGGCCTC GGGGCGCGAC TGCACGAGCC TGATCGTCTC CGTGCCCAAC
CGTCCCGGCG CCGTGCACGA CCTGCTGGTG CCGCTGAAGG TCAACAATGT GTCCATGACC
CGGTTCGAGT CGCGCCCGGC GCGCACCGGC CAGTGGGAGT ACTACTTCTA CATCGACCTG
GACGGCCATC CCTCGCAGCC CAACGTGGCT GCCGCGCTGG CCGAACTGCG CGGCCTCTGC
GCGTTCTACA AGGTGCTGGG CGCCTATCCC GTCAAAGCCT GA
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| Protein sequence | MTASAPTPPS SPDNSESLAD LRVQIDSLDQ QLLGLLNERA HVAELVGEVK KREGTPYFRP
DRVAQVIEKM QKSNAGPLKD LHVAAIWREI MSACLALESP QRVAVLGPEG TFCEQAAIEY
FGGAADLIYC ASFDEVFHAT AAGSAQYGVV GVENSTEGVV TRSLDLFLHS PTHVVGEVSL
LVRHHLLRSS NSLEGIEAVL AHPQALAQCQ TWLSKHLPNA ERRAVSSNAE GARLAATNPA
WAALAGERAA TRFGLHIVAH AIQDDSYNRT RFSVICLPQT LAMPPASGRD CTSLIVSVPN
RPGAVHDLLV PLKVNNVSMT RFESRPARTG QWEYYFYIDL DGHPSQPNVA AALAELRGLC
AFYKVLGAYP VKA
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