Gene Vapar_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1612 
Symbol 
ID7974841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1741452 
End bp1741790 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content66% 
IMG OID644792212 
Producthypothetical protein 
Protein accessionYP_002943529 
Protein GI239814619 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACC TCCTGTGGCT GCTCAAGGCA GCCATTTTTT TTACGCTTTT TGCTTTCGCG 
CTGAACAACC AGCACGACGC GACCGTCTAT TTCTTCTTCG GCACGCATTG GCGTGCGCCC
CTGGTGCTCG TCGTGCTCGC GGCTTTCGCC GGCGGCCTCG TGGTGGGTGC GCTCGGCATG
CTGCCCGGAT GGTGGAAGCA CCGTGCGGCG GCGGCGCAGG TTCCGGCCGC GCGCGGCGAC
GAAGCCGCGG CGCCTGCACC ATCCACGCCT GCTCCGGCAG CGGCGCCGCC GTCCATTTCC
GCCACCGACC TGCCCACCGT ACGCCAACAT GGACTTTGA
 
Protein sequence
MKYLLWLLKA AIFFTLFAFA LNNQHDATVY FFFGTHWRAP LVLVVLAAFA GGLVVGALGM 
LPGWWKHRAA AAQVPAARGD EAAAPAPSTP APAAAPPSIS ATDLPTVRQH GL